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Reorganise local modules into subfolder/main.nf for consistency #1898

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Reorganise local modules into subfolder/main.nf for consistency

Reorganise local modules into subfolder/main.nf for consistency #1898

Triggered via pull request October 11, 2023 19:18
@drpatelhdrpatelh
synchronize #1083
reorg_local_modules_to_subfolders
Status Cancelled
Total duration 7m 48s
Artifacts –

ci.yml

on: pull_request
Matrix: Test HISAT2 with workflow parameters
Matrix: Test Salmon with workflow parameters
Matrix: Test STAR RSEM with workflow parameters
Matrix: Test STAR Salmon with workflow parameters
Matrix: Run pipeline with test data
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22 errors
Test STAR Salmon with workflow parameters (--bam_csi_index)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Run pipeline with test data (23.04.0)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--gtf false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR RSEM with workflow parameters (--skip_qc)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR RSEM with workflow parameters (--rsem_index false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Run pipeline with test data (latest-everything)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--min_mapped_reads 90)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--skip_trimming)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--skip_qc)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test HISAT2 with workflow parameters (--skip_qc)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test Salmon with workflow parameters (--salmon_index false --transcript_fasta false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test HISAT2 with workflow parameters (--hisat2_index false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--remove_ribo_rna --skip_qualimap)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--featurecounts_group_type false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--transcript_fasta false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--star_index false)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test Salmon with workflow parameters (--skip_alignment --skip_pseudo_alignment)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--with_umi --skip_trimming)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test Salmon with workflow parameters (--skip_qc)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--trimmer fastp)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--with_umi)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists
Test STAR Salmon with workflow parameters (--save_align_intermeds --save_reference)
Canceling since a higher priority waiting request for 'nf-core CI-1083' exists