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dialvarezs committed Oct 31, 2024
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12 changes: 7 additions & 5 deletions CHANGELOG.md
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Expand Up @@ -7,17 +7,23 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Added`

- [#707](https://github.com/nf-core/mag/pull/707) - Make Bin QC a subworkflow (added by @dialvarezs)
- [#707](https://github.com/nf-core/mag/pull/707) - Added CheckM2 as an alternative bin completeness and QC tool (added by @dialvarezs)
- [#708](https://github.com/nf-core/mag/pull/708) - Added `--exclude_unbins_from_postbinning` parameter to exclude unbinned contigs from post-binning processes, speeding up Prokka in some cases (added by @dialvarezs)

### `Changed`

### `Fixed`

- [#708](https://github.com/nf-core/mag/pull/708) - Fixed channel passed as GUNC input (added by @dialvarezs)
- [#707](https://github.com/nf-core/mag/pull/708) - Fixed channel passed as GUNC input (added by @dialvarezs)

### `Dependencies`

| Tool | Previous version | New version |
| ------- | ---------------- | ----------- |
| CheckM2 | | 1.0.2 |
| BUSCO | 5.4.3 | 5.8.0 |

### `Deprecated`

## 3.2.1 [2024-10-30]
Expand All @@ -32,10 +38,6 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Dependencies`

| Tool | Previous version | New version |
| ------- | ---------------- | ----------- |
| CheckM2 | | 1.0.2 |

### `Deprecated`

## 3.2.0 [2024-10-27]
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -121,7 +121,7 @@ params {
refine_bins_dastool = false
refine_bins_dastool_threshold = 0.5
postbinning_input = 'raw_bins_only'
exclude_unbins_from_postbinning = false
exclude_unbins_from_postbinning = false

// Bin QC
skip_binqc = false
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