318 update some modeles for tes compliance #1018
GitHub Actions / JUnit Test Report
failed
Sep 16, 2024 in 0s
1 tests run, 0 passed, 0 skipped, 1 failed.
Annotations
github-actions / JUnit Test Report
nf.Parameters: --nf_core_pipeline rnaseq
Assertion failed:
1 of 3 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.08.0-edge
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-47ba6ce2b9d272e12d6a519c81aeca6a.nf` [voluminous_meitner] DSL2 - revision: 68dcf2aadf
Downloading plugin [email protected]
[11/9be63c] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[b3/da5ea4] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[9e/989378] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[52/52aafd] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[9f/d91e3b] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[ed/e2d66c] Submitted process > SRA:SRA_FASTQ_FTP (SRX6725035_SRR9984183)
[6f/0aab04] Submitted process > SRA:SRA_FASTQ_FTP (DRX026011_DRR028935)
[5f/becc16] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[a0/690848] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[b9/f65af4] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[f7/f194ea] Submitted process > SRA:SRA_FASTQ_FTP (ERX1234253_ERR1160846)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[11/686acc] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[07/f6b58c] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
WARN: Process `SRA:MULTIQC_MAPPINGS_CONFIG` publishDir path contains a variable with a null value
Nextflow stderr:
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