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Proposal: DSL2+ #312

Closed
wants to merge 16 commits into from
Closed

Proposal: DSL2+ #312

wants to merge 16 commits into from

Commits on Apr 27, 2024

  1. Replace ext/publishDir with params/publish definition 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Apr 27, 2024
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  2. Update config to comply with strict parser 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Apr 27, 2024
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  3. Use param schemas as source of truth, convert to YAML 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Apr 27, 2024
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  4. Use eval output, topic channels to collect tool versions 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Apr 27, 2024
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Commits on May 19, 2024

  1. Refactor params as workflow inputs 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed May 19, 2024
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  2. Update workflow output definition 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed May 19, 2024
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  3. Update workflow params definition 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed May 19, 2024
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  4. Add workflow output schema 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed May 19, 2024
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Commits on Jun 10, 2024

  1. Rename schema_params.yml to schema_inputs.yml 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Jun 10, 2024
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  2. Remove trailing slashes from target names 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Jun 10, 2024
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Commits on Jun 11, 2024

  1. Add wrapper workflow for ASPERA_CLI 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Jun 11, 2024
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Commits on Jun 21, 2024

  1. Initialize ch_fastq 

    Signed-off-by: Ben Sherman <[email protected]>
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    bentsherman committed Jun 21, 2024
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Commits on Jun 26, 2024

  1. Remove import statements 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Jun 26, 2024
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Commits on Sep 23, 2024

  1. Fix warnings 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Sep 23, 2024
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  2. Update workflow outputs (second preview) 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Sep 23, 2024
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Commits on Nov 2, 2024

  1. Refactor output targets to samples and versions 

    Signed-off-by: Ben Sherman <[email protected]>
    @bentsherman
    bentsherman committed Nov 2, 2024
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