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Add an outdir parameter for 'hello genomics' onwards #433

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merged 6 commits into from
Nov 17, 2024

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pinin4fjords
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@pinin4fjords pinin4fjords commented Nov 4, 2024

Training participants during summit highlighted that the outdir in the nf-test part had no effect. That's because the workflow didn't have an outdir parameter.

I've removed the hardcoded publishDir back as far as 'hello genomics'.

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kenibrewer
kenibrewer previously approved these changes Nov 4, 2024
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Nice catch!

@pinin4fjords
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@kenibrewer I re-requested review, since I extended this all the way back the start of hello genomics

mribeirodantas
mribeirodantas previously approved these changes Nov 4, 2024
@pinin4fjords pinin4fjords changed the title Add an outdir parameter to nf-tests section Add an outdir parameter for 'hello genomics' onwards Nov 4, 2024
@kenibrewer kenibrewer merged commit 5de49e5 into master Nov 17, 2024
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@kenibrewer kenibrewer deleted the fix_nftest_outputs branch November 17, 2024 16:48
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3 participants