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Merge branch 'develop' of github.com:neurophysiological-analysis/FiNN… #35

Merge branch 'develop' of github.com:neurophysiological-analysis/FiNN…

Merge branch 'develop' of github.com:neurophysiological-analysis/FiNN… #35

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on:
push:
branches: [ develop ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
with:
lfs: true
- name: Checkout LFS objects
run: |
git lfs checkout
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt update && sudo apt install -y libegl1-mesa-dev
- name: Install python3 testing dependencies
run: |
python -m pip install --upgrade pip
- name: Install R
uses: r-lib/actions/setup-r@v2
with:
r-version: '4.1.2'
- name: Install R dependencies
run: |
R -e "install.packages(c('Matrix'))"
R -e "install.packages(c('car'))"
R -e "install.packages(c('carData'))"
R -e "install.packages(c('lme4'))"
- name: Install python3 FiNNPy dependencies #dependencies are installed here to make sure R is found
run: |
pip install -r requirements.txt
- name: Build & install FiNNPy
run: |
pip install build
python -m build
python -m pip install .
- name: Test with unittest
run: |
python -m unittest discover -s finnpy/tests/ -p "*.py"