feat: make seisbench dependency optional (#578) #2362
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| name: Python package | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.8', '3.10'] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ~/.cache/pip | |
| ${{ env.pythonLocation }}/bin/* | |
| ${{ env.pythonLocation }}/include | |
| ${{ env.pythonLocation }}/lib/python*/site-packages/* | |
| !${{ env.pythonLocation }}/bin/pip* | |
| !${{ env.pythonLocation }}/lib/python*/site-packages/pip* | |
| !${{ env.pythonLocation }}/lib/python*/site-packages/setuptools* | |
| key: ${{ env.pythonLocation }}-${{ hashFiles('setup.py') }}-${{ hashFiles('requirements.txt') }} | |
| - name: Install CXX Dependencies | |
| run: sudo apt-get update && sudo apt-get install -yq gfortran libboost-dev libboost-serialization-dev liblapack-dev | |
| - name: Install MongoDB | |
| uses: supercharge/[email protected] | |
| - name: Install Python Dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install --upgrade --upgrade-strategy eager pytest pytest-cov | |
| if [ -f requirements.txt ]; then pip install --upgrade --upgrade-strategy eager -r requirements.txt; fi | |
| - name: Install Apache Spark | |
| run: | | |
| mkdir -p /opt | |
| wget -q -O /opt/spark.tgz https://archive.apache.org/dist/spark/spark-3.0.0/spark-3.0.0-bin-hadoop2.7.tgz | |
| tar xzf /opt/spark.tgz -C /opt/ | |
| rm /opt/spark.tgz | |
| export SPARK_HOME=/opt/spark-3.0.0-bin-hadoop2.7 | |
| echo "SPARK_HOME=/opt/spark-3.0.0-bin-hadoop2.7" >> $GITHUB_ENV | |
| export PATH=$PATH:/opt/spark-3.0.0-bin-hadoop2.7/bin | |
| echo "/opt/spark-3.0.0-bin-hadoop2.7/bin" >> $GITHUB_PATH | |
| python -m pip install --upgrade --upgrade-strategy eager pyspark pytest-spark | |
| - name: Install | |
| run: python -m pip install -C--global-option=build -C--global-option=--debug -v '.[seisbench]' | |
| - name: Test with pytest | |
| run: | | |
| export MSPASS_HOME=$(pwd) | |
| export SPARK_LOCAL_IP=127.0.0.1 | |
| pytest --cov=mspasspy python/tests/ | |
| make test -C build/temp.*/ | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| fail_ci_if_error: false | |
| token: ${{ secrets.CODECOV_TOKEN }} # required | |
| env_vars: OS,PYTHON | |
| verbose: true | |
| - name: Build Documentation | |
| if: ${{ matrix.python-version == '3.8' }} | |
| run: | | |
| export MSPASS_HOME=$(pwd) | |
| sudo apt-get update && sudo apt-get install -yq doxygen pandoc | |
| pip install -r docs/requirements.txt | |
| cd docs | |
| ls | |
| make html | |
| - name: Deploy to GitHub Pages | |
| if: ${{ github.ref == 'refs/heads/master' && matrix.python-version == '3.8' }} | |
| uses: JamesIves/[email protected] | |
| with: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| BRANCH: gh-pages | |
| FOLDER: docs/build/html | |
| CLEAN: false | |