Set coverage to best parameter

metagenopolis · Jun 20, 2024 · 920b04f · 920b04f
1 parent 62c681d
commit 920b04f
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/meteor/strain.py b/meteor/strain.py
@@ -40,7 +40,7 @@ class Strain(Session):
     MIN_MIN_MSP_COVERAGE: ClassVar[int] = 1
     MAX_MIN_MSP_COVERAGE: ClassVar[int] = 100
     DEFAULT_MIN_MSP_COVERAGE: ClassVar[int] = 50
-    DEFAULT_MIN_GENE_COVERAGE: ClassVar[float] = 0.8
+    DEFAULT_MIN_GENE_COVERAGE: ClassVar[float] = 0.5
     DEFAULT_NUM_THREADS: ClassVar[int] = 1
     DEFAULT_MIN_DEPTH: ClassVar[int] = 3
     MIN_DEPTH: ClassVar[int] = 1