testing #19

	name: testing

	on: [push, pull_request]

	jobs:
	pytest:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ["3.10", "3.11"]
	os: [ubuntu-22.04, macos-latest]
	steps:
	- uses: actions/checkout@v4
	- uses: ConorMacBride/install-package@v1
	with:
	brew: bowtie2 bcftools
	apt: bowtie2 bcftools
	- name: Install Python
	uses: actions/setup-python@v4
	# see details (matrix, python-version, python-version-file, etc.)
	# https://github.com/actions/setup-python
	- name: Install poetry
	uses: abatilo/actions-poetry@v2
	- name: Install the project dependencies
	run: poetry install --only test -C meteor
	- name: Run the automated tests (for example)
	run: poetry run -C meteor pytest --cov=meteor --cov-report xml

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