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mattclifford1 committed Oct 9, 2024
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2 changes: 1 addition & 1 deletion dev_resources/docs/_build/html/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 6276d0d4484f9029f0ed96ba5f4da283
config: 8f79c8e4766d3f87783beac3d577d8e5
tags: 645f666f9bcd5a90fca523b33c5a78b7
61 changes: 29 additions & 32 deletions dev_resources/docs/_build/html/IQM_Vis.UI.html

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33 changes: 15 additions & 18 deletions dev_resources/docs/_build/html/IQM_Vis.data_handlers.html
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<!DOCTYPE html>
<html class="writer-html5" lang="en" >
<head>
<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
<meta charset="utf-8" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />

<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>IQM_Vis.data_handlers package &mdash; IQM-Vis 0.2 documentation</title>
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<![endif]-->

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/jquery.js"></script>
<script src="_static/underscore.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script crossorigin="anonymous" integrity="sha256-Ae2Vz/4ePdIu6ZyI/5ZGsYnb+m0JlOmKPjt6XZ9JJkA=" src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
<script src="_static/js/theme.js"></script>
<link rel="author" title="About these documents" href="about.html" />
Expand All @@ -27,15 +28,11 @@
<nav data-toggle="wy-nav-shift" class="wy-nav-side">
<div class="wy-side-scroll">
<div class="wy-side-nav-search" >



<a href="index.html" class="icon icon-home">
IQM-Vis
<a href="index.html" class="icon icon-home"> IQM-Vis
</a>
<div role="search">
<form id="rtd-search-form" class="wy-form" action="search.html" method="get">
<input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
<input type="text" name="q" placeholder="Search docs" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
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<div class="rst-content">
<div role="navigation" aria-label="Page navigation">
<ul class="wy-breadcrumbs">
<li><a href="index.html" class="icon icon-home" aria-label="Home"></a></li>
<li><a href="index.html" class="icon icon-home"></a></li>
<li class="breadcrumb-item active">IQM_Vis.data_handlers package</li>
<li class="wy-breadcrumbs-aside">
<a href="_sources/IQM_Vis.data_handlers.rst.txt" rel="nofollow"> View page source</a>
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<div itemprop="articleBody">

<section id="iqm-vis-data-handlers-package">
<h1>IQM_Vis.data_handlers package<a class="headerlink" href="#iqm-vis-data-handlers-package" title="Permalink to this heading"></a></h1>
<h1>IQM_Vis.data_handlers package<a class="headerlink" href="#iqm-vis-data-handlers-package" title="Permalink to this headline"></a></h1>
<section id="submodules">
<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this heading"></a></h2>
<h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this headline"></a></h2>
</section>
<section id="module-IQM_Vis.data_handlers.data_api">
<span id="iqm-vis-data-handlers-data-api-module"></span><h2>IQM_Vis.data_handlers.data_api module<a class="headerlink" href="#module-IQM_Vis.data_handlers.data_api" title="Permalink to this heading"></a></h2>
<span id="iqm-vis-data-handlers-data-api-module"></span><h2>IQM_Vis.data_handlers.data_api module<a class="headerlink" href="#module-IQM_Vis.data_handlers.data_api" title="Permalink to this headline"></a></h2>
<p>generic image and metric data class constructor
both use the same image for reference and transformed</p>
<dl class="py class">
Expand All @@ -118,11 +115,11 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
<dl class="py class">
<dt class="sig sig-object py" id="IQM_Vis.data_handlers.data_api.dataset_holder">
<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">IQM_Vis.data_handlers.data_api.</span></span><span class="sig-name descname"><span class="pre">dataset_holder</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">image_list:</span> <span class="pre">list</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">metrics:</span> <span class="pre">dict</span> <span class="pre">=</span> <span class="pre">{}</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">metric_images:</span> <span class="pre">dict</span> <span class="pre">=</span> <span class="pre">{}</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">image_loader=&lt;function</span> <span class="pre">load_image&gt;</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">image_pre_processing=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">image_post_processing=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">image_list_to_transform=None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">human_exp_csv=None</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/IQM_Vis/data_handlers/data_api.html#dataset_holder"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#IQM_Vis.data_handlers.data_api.dataset_holder" title="Permalink to this definition"></a></dt>
<dd><p>Bases: <a class="reference internal" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader" title="IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader"><code class="xref py py-class docutils literal notranslate"><span class="pre">base_dataset_loader</span></code></a></p>
<dd><p>Bases: <a class="reference internal" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader" title="IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader"><code class="xref py py-class docutils literal notranslate"><span class="pre">IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader</span></code></a></p>
<p>Stores images and metrics to communicate with the UI via the IQM-Vis data
API.</p>
<dl class="field-list simple">
<dt class="field-odd">Parameters<span class="colon">:</span></dt>
<dt class="field-odd">Parameters</dt>
<dd class="field-odd"><ul class="simple">
<li><p><strong>image_list</strong> (<em>list</em>) – list of image file paths</p></li>
<li><p><strong>metrics</strong> (<em>dict</em>) – dictionary with keys of the metric names and values
Expand Down Expand Up @@ -216,12 +213,12 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this

</section>
<section id="module-IQM_Vis.data_handlers.data_api_abstract">
<span id="iqm-vis-data-handlers-data-api-abstract-module"></span><h2>IQM_Vis.data_handlers.data_api_abstract module<a class="headerlink" href="#module-IQM_Vis.data_handlers.data_api_abstract" title="Permalink to this heading"></a></h2>
<span id="iqm-vis-data-handlers-data-api-abstract-module"></span><h2>IQM_Vis.data_handlers.data_api_abstract module<a class="headerlink" href="#module-IQM_Vis.data_handlers.data_api_abstract" title="Permalink to this headline"></a></h2>
<p>blueprint for data loader API</p>
<dl class="py class">
<dt class="sig sig-object py" id="IQM_Vis.data_handlers.data_api_abstract.base_dataloader">
<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">IQM_Vis.data_handlers.data_api_abstract.</span></span><span class="sig-name descname"><span class="pre">base_dataloader</span></span><a class="reference internal" href="_modules/IQM_Vis/data_handlers/data_api_abstract.html#base_dataloader"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataloader" title="Permalink to this definition"></a></dt>
<dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">ABC</span></code></p>
<dd><p>Bases: <code class="xref py py-class docutils literal notranslate"><span class="pre">abc.ABC</span></code></p>
<dl class="py method">
<dt class="sig sig-object py" id="IQM_Vis.data_handlers.data_api_abstract.base_dataloader.get_image_to_transform">
<em class="property"><span class="pre">abstract</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">get_image_to_transform</span></span><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/IQM_Vis/data_handlers/data_api_abstract.html#base_dataloader.get_image_to_transform"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataloader.get_image_to_transform" title="Permalink to this definition"></a></dt>
Expand Down Expand Up @@ -267,7 +264,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
<dl class="py class">
<dt class="sig sig-object py" id="IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader">
<em class="property"><span class="pre">class</span><span class="w"> </span></em><span class="sig-prename descclassname"><span class="pre">IQM_Vis.data_handlers.data_api_abstract.</span></span><span class="sig-name descname"><span class="pre">base_dataset_loader</span></span><a class="reference internal" href="_modules/IQM_Vis/data_handlers/data_api_abstract.html#base_dataset_loader"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader" title="Permalink to this definition"></a></dt>
<dd><p>Bases: <a class="reference internal" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataloader" title="IQM_Vis.data_handlers.data_api_abstract.base_dataloader"><code class="xref py py-class docutils literal notranslate"><span class="pre">base_dataloader</span></code></a></p>
<dd><p>Bases: <a class="reference internal" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataloader" title="IQM_Vis.data_handlers.data_api_abstract.base_dataloader"><code class="xref py py-class docutils literal notranslate"><span class="pre">IQM_Vis.data_handlers.data_api_abstract.base_dataloader</span></code></a></p>
<dl class="py method">
<dt class="sig sig-object py" id="IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader.get_reference_image_by_index">
<em class="property"><span class="pre">abstract</span><span class="w"> </span></em><span class="sig-name descname"><span class="pre">get_reference_image_by_index</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">index</span></span></em><span class="sig-paren">)</span><a class="reference internal" href="_modules/IQM_Vis/data_handlers/data_api_abstract.html#base_dataset_loader.get_reference_image_by_index"><span class="viewcode-link"><span class="pre">[source]</span></span></a><a class="headerlink" href="#IQM_Vis.data_handlers.data_api_abstract.base_dataset_loader.get_reference_image_by_index" title="Permalink to this definition"></a></dt>
Expand All @@ -277,7 +274,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this

</section>
<section id="module-IQM_Vis.data_handlers">
<span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-IQM_Vis.data_handlers" title="Permalink to this heading"></a></h2>
<span id="module-contents"></span><h2>Module contents<a class="headerlink" href="#module-IQM_Vis.data_handlers" title="Permalink to this headline"></a></h2>
</section>
</section>

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