ABBA-QuPath Registration Exporter

A Python app and Groovy script that helps export transformed cell detections from ABBA-registered data stored in QuPath projects.

Installation

pip install ABBA-QuPath-RegistrationExporter

pip install --upgrade ABBA-QuPath-RegistrationExporter

regexport

python -m pytest

Name		Name	Last commit message	Last commit date
Latest commit History 205 Commits
.github/workflows		.github/workflows
example_data/tsvs_exported_from_qupath		example_data/tsvs_exported_from_qupath
features		features
imgs		imgs
notebooks		notebooks
regexport		regexport
tests		tests
.coveragerc		.coveragerc
.coveralls.yml		.coveralls.yml
.gitattributes		.gitattributes
.gitignore		.gitignore
CHANGELOG.md		CHANGELOG.md
LICENSE.txt		LICENSE.txt
MANIFEST.in		MANIFEST.in
README.md		README.md
dev_docs.md		dev_docs.md
pytest.ini		pytest.ini
setup.py		setup.py
sonarcloud.properties		sonarcloud.properties