v0.4.0-rc1
Pre-release
Pre-release
What's Changed
- September cleaning 1 by @cthoyt in #413
- Standardize usage of
oboInOwl
data by @cthoyt in #414 - Refactor SPARQL utilities to use
curies.Converter
by @cthoyt in #415 - Add converter to MappingSetDocument and MappingSetDataFrame by @cthoyt in #417
- Update testing and type checking by @cthoyt in #418
- Better handle URI fields when getting prefixes from metadata by @cthoyt in #420
- Use
curies.Converter
in OntoPortal exporter by @cthoyt in #416 - Use
curies.Converter
in Metadata object by @cthoyt in #421 - Fix ORCID URI prefixes in test data by @cthoyt in #423
- Improve MSDF instantiation and context functions by @cthoyt in #422
- Update context loading by @cthoyt in #425
- Remove needless output during tests by @cthoyt in #428
- Re-implement reconciliation code with
curies
by @cthoyt in #426 - Switch MSDF to use
curies.Converter
natively by @cthoyt in #430 - Simplify parsing SSSOM w/
curies.chain
by @cthoyt in #431 - Explicitly use Python engine for pandas by @cthoyt in #435
- Cache schema object by @cthoyt in #443
- Standardize MSDF by @cthoyt in #438
- Be less draconian on alignment api parsing by @matentzn in #437
- Make MSDF with default converter by @cthoyt in #444
- Get MSDF from LinkML objects by @cthoyt in #440
- Remove "None" checks for df and metadata by @cthoyt in #442
- Rename type hint for Converters by @cthoyt in #445
- Remove duplicate definition of schema constant by @cthoyt in #446
- Test old versions of Pandas by @hrshdhgd in #433
- Refactor SSSOM Schema usage by @cthoyt in #449
- Refactor mapping code by @cthoyt in #450
- Added setuptools install to poetry and latest version of poetry by @hrshdhgd in #451
- Consolidate mapping metadata setting by @cthoyt in #455
- Refactor
_extract_global_metadata()
by @cthoyt in #452 - Directly unpack metadata tuple by @cthoyt in #453
- Cleanup Metadata usages by @cthoyt in #447
- Improve CURIE and IRI validation by @cthoyt in #459
- Update type hints for prefix map merging by @cthoyt in #454
- Clean up extract_iri functionality by @cthoyt in #460
- Upstream processing ambiguous URI or CURIE by @cthoyt in #463
- Update SSSOM Extended Prefix Map by @github-actions in #466
- Fix test after EPM update by @matentzn in #468
- Optimization of some functions by @hrshdhgd in #462
New Contributors
- @github-actions made their first contribution in #466
Full Changelog: v0.3.41...v0.4.0-rc1