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@loosolab

Looso bioinformatics lab

Group of bioinformatics at the Max Planck Institute for Heart and Lung Research

Popular repositories Loading

  1. TOBIAS TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    Python 197 41

  2. scanpro scanpro Public

    Jupyter Notebook 16 1

  3. UROPA UROPA Public

    Universal RObust Peak Annotator

    Python 15 6

  4. i2dash i2dash Public

    i2dash: interactive and iterative dashboards.

    R 10 3

  5. TF-COMB TF-COMB Public

    Transcription Factor Co-Occurrence using Market Basket analysis

    Python 10 1

  6. cardiac-progenitors cardiac-progenitors Public

    Single cell RNA-seq and ATAC seq analysis of cardiac progenitor cell transition states and lineage settlement

    R 8 3

Repositories

Showing 10 of 26 repositories
  • FRED_whitelists Public
    loosolab/FRED_whitelists’s past year of commit activity
    Python 0 0 0 0 Updated Nov 15, 2024
  • denis Public

    framework for de novo motif generation on ATAC-seq

    loosolab/denis’s past year of commit activity
    Python 2 MIT 0 1 0 Updated Nov 12, 2024
  • SC-Framework Public

    A framework for single cell analysis

    loosolab/SC-Framework’s past year of commit activity
    Python 1 0 0 0 Updated Nov 8, 2024
  • biodaten24-25-large_bulk_multiomics Public
    loosolab/biodaten24-25-large_bulk_multiomics’s past year of commit activity
    2 0 0 0 Updated Nov 7, 2024
  • Code_Li_et_al_2024_sEH_monocytes Public
    loosolab/Code_Li_et_al_2024_sEH_monocytes’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 20, 2024
  • scanpro Public
    loosolab/scanpro’s past year of commit activity
    Jupyter Notebook 16 MIT 1 0 0 Updated Aug 1, 2024
  • TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    loosolab/TOBIAS’s past year of commit activity
    Python 197 MIT 41 2 0 Updated Jul 15, 2024
  • biodaten23-24-scATAC-clustering Public
    loosolab/biodaten23-24-scATAC-clustering’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Feb 28, 2024
  • TF-COMB Public

    Transcription Factor Co-Occurrence using Market Basket analysis

    loosolab/TF-COMB’s past year of commit activity
    Python 10 MIT 1 14 0 Updated Jan 30, 2024
  • UROPA Public

    Universal RObust Peak Annotator

    loosolab/UROPA’s past year of commit activity
    Python 15 MIT 6 5 0 Updated Dec 19, 2023
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