Split rDNA code into multiple R files #9
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: build-check-test | |
| on: [push, pull_request, workflow_dispatch] | |
| jobs: | |
| Bibliography: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-tinytex@v2 | |
| - name: Install LaTeX packages | |
| run: tlmgr install urlbst | |
| - uses: gradle/wrapper-validation-action@v1 | |
| - uses: actions/cache@v3 | |
| id: pandoc | |
| with: | |
| path: pandoc-2.19.2-1 | |
| key: pandoc-2.19.2-1 | |
| - name: Download pandoc-2.19.2-1-amd64.deb | |
| if: steps.pandoc.outputs.cache-hit != 'true' | |
| run: | | |
| mkdir pandoc-2.19.2-1 | |
| cd pandoc-2.19.2-1 | |
| wget https://github.com/jgm/pandoc/releases/download/2.19.2/pandoc-2.19.2-1-amd64.deb | |
| - name: Install pandoc | |
| run: | | |
| cd pandoc-2.19.2-1 | |
| sudo dpkg -i pandoc-2.19.2-1-amd64.deb | |
| - name: Check pandoc version | |
| run: pandoc --version | |
| - name: Setup Gradle | |
| uses: gradle/[email protected] | |
| - name: Execute Gradle build for bibliography | |
| run: ./gradlew :bibliography:build | |
| - name: Store artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Bibliography | |
| path: build/bibliography.* | |
| DNA: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: gradle/wrapper-validation-action@v1 | |
| - uses: actions/setup-java@v3 | |
| with: | |
| distribution: temurin | |
| java-version: 11 | |
| cache: gradle | |
| - name: Setup Gradle | |
| uses: gradle/[email protected] | |
| - name: Execute Gradle build for DNA | |
| run: ./gradlew :dna:build | |
| - name: Store artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: DNA | |
| path: build/*.jar | |
| rDNA: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - name: Restore R Packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/R | |
| key: ${{ runner.os }}-r-rDNA-${{ hashFiles('**/DESCRIPTION') }}-v1 | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache-version: 2 | |
| working-directory: rDNA/rDNA | |
| extra-packages: | | |
| any::roxygen2 | |
| - uses: gradle/wrapper-validation-action@v1 | |
| - name: Setup Gradle | |
| uses: gradle/[email protected] | |
| - name: Restore Gradle Cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.gradle/caches | |
| key: ${{ runner.os }}-gradle-${{ hashFiles('**/build.gradle') }}-v1 | |
| - name: Execute Gradle build for rDNA | |
| run: ./gradlew :rDNA:build | |
| - name: Store artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: rDNA | |
| path: build/*.tar.gz | |
| rDNA-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Restore R Packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/R | |
| key: ${{ runner.os }}-r-rDNA-check-${{ hashFiles('**/DESCRIPTION') }}-v1 | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache-version: 2 | |
| working-directory: rDNA/rDNA | |
| extra-packages: | | |
| any::rcmdcheck | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| working-directory: rDNA/rDNA | |
| upload-snapshots: true |