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use variable that is in the cxg schema spec #109

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2 changes: 1 addition & 1 deletion vignettes/example_workflow.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -141,7 +141,7 @@ To make things a bit quicker we only test the first 1000 genes but if you have a

```{r markers}
# Set cell identities to the provided cell type annotation
SeuratObject::Idents(seurat) <- "Cell_Type"
SeuratObject::Idents(seurat) <- "cell_type"
# Normalise the data
seurat <- Seurat::NormalizeData(seurat)
# Test for marker genes
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