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Madrid Nextflow

Run

nextflow run main.nf

Intellij

Mark source directory as Generated Sources Root

Debug

in a terminal execute:

NXF_JVM_ARGS="-Xdebug -Xrunjdwp:server=y,transport=dt_socket,address=5000,suspend=y" nextflow run main.nf --max=3

create a remote debug session (port 5000), put breakpoints at source/Madrid.groovy and attach to the remote session

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an example of Nexflow using OpenData from Madrid

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