circtools CI

Fixing bedtools permissions #863

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Run time

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Job	Run time
R 4.4.0 \| Python 3.8 \| ubuntu-20.04	3m 12s
R 4.4.0 \| Python 3.9 \| ubuntu-20.04	3m 38s
R 4.4.0 \| Python 3.10 \| ubuntu-20.04	3m 12s
R 4.4.0 \| Python 3.11 \| ubuntu-20.04	3m 26s
R 4.4.0 \| Python 3.8 \| ubuntu-22.04	2m 55s
R 4.4.0 \| Python 3.9 \| ubuntu-22.04	2m 55s
R 4.4.0 \| Python 3.10 \| ubuntu-22.04	2m 53s
R 4.4.0 \| Python 3.11 \| ubuntu-22.04	2m 41s
R 4.4.0 \| Python 3.8 \| ubuntu-24.04	3m 14s
R 4.4.0 \| Python 3.9 \| ubuntu-24.04	3m 42s
R 4.4.0 \| Python 3.10 \| ubuntu-24.04	3m 17s
R 4.4.0 \| Python 3.11 \| ubuntu-24.04	2m 52s
	37m 57s