Add README for T2w CSA

ivadomed · Jan 20, 2023 · a0ea789 · a0ea789
1 parent 6bc928e
commit a0ea789
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/scripts-t2w_csa/README.md b/scripts-t2w_csa/README.md
@@ -0,0 +1,7 @@
+# T2w CSA
+
+This folder contains bash scripts used for calculation of cross-sectional area (CSA) at C2-C3 vertebral levels from 
+T2w images for CanProCo and spine-generic dataset. Both scripts can be run using SCT wrapper `sct_run_batch`.
+
+The folder also contains python script used for figure creation (rainplot, scatter plot with linear fit) and statistics 
+computation (ANOVA, Kruskal-Wallis H-test, partial correlation).