Skip to content

Visualize multiple sequence alignment as variation graph on Sequence Tube Map

Notifications You must be signed in to change notification settings

hanzou666/msa_tubemap

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

MSA Tube Map

MSA Tube Map is a wrapper of Sequence Tube Maps

Usage

Online Version

Go to https://msatubemap.herokuapp.com/msatubemap

Run on your local environment

Dependencies

Run

git clone --recursive https://github.com/hanzou666/msa_tubemap.git
cd msa_tubemap
pipenv install
pipenv run start

Go to http://localhost:5042/msatubemap

Input file

MSA Tube Map uses a FASTA format file after multiple sequence alignment. Either nucleotide or protein sequences are acceptable.

About

Visualize multiple sequence alignment as variation graph on Sequence Tube Map

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published