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fix alevin combine #3602

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Sep 13, 2022
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fix alevin combine #3602

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15 changes: 8 additions & 7 deletions topics/transcriptomics/tutorials/scrna-case_alevin-combine-datasets/tutorial.md
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Expand Up @@ -73,15 +73,15 @@ The sample data is a subset of the reads in a mouse dataset of fetal growth rest

You can access the data for this tutorial in multiple ways:

1. **Your own history** - If you're feeling confident that you successfully ran a workflow on all 7 samples from the previous tutorial, and that your resulting 7 AnnData objects look right (you can compare with the [answer key history](https://usegalaxy.eu/u/wendi.bacon.training/h/cs2combining-datasets-after-pre-processing---input-1)), then you can use those! To avoid a million-line history, I recommend dragging the resultant datasets into a fresh history
>
1. **Your own history** - If you're feeling confident that you successfully ran a workflow on all 7 samples from the previous tutorial, and that your resulting 7 AnnData objects look right (you can compare with the [answer key history](https://usegalaxy.eu/u/wendi.bacon.training/h/cs2combining-datasets-after-pre-processing---input-1)), then you can use those! To avoid a million-line history, I recommend dragging the resultant datasets into a fresh history

{% snippet faqs/galaxy/histories_copy_dataset.md %}
2. **Importing from a history** - You can import [this history](https://usegalaxy.eu/u/wendi.bacon.training/h/cs2combining-datasets-after-pre-processing---input-1)
>

2. **Importing from a history** - You can import [this history](https://usegalaxy.eu/u/wendi.bacon.training/h/cs2combining-datasets-after-pre-processing---input-1)

{% snippet faqs/galaxy/histories_import.md %}
3. **Uploading from Zenodo** (see below)

3. **Uploading from Zenodo** (see below)


> ### {% icon hands_on %} Hands-on: Data upload for 7 files
Expand Down Expand Up @@ -112,6 +112,7 @@ You can access the data for this tutorial in multiple ways:
Inspect the {% icon galaxy-eye %} `Experimental Design` text file. This shows you how each `N70X` corresponds to a sample, and whether that sample was from a male or female. This will be important metadata to add to our sample, which we will add very similarly to how you added the `gene_name` and `mito` metadata previously!

## Concatenating objects

> ### {% icon hands_on %} Hands-on: Concatenating AnnData objects
>
> 1. {% tool [Manipulate AnnData](toolshed.g2.bx.psu.edu/repos/iuc/anndata_manipulate/anndata_manipulate/0.7.5+galaxy1){% icon tool %} with the following parameters:
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