Code

adding gem_tools#6598

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Merged

bgruening merged 16 commits intogalaxyproject:maingalaxyproject/tools-iuc:mainfrom emikar:gem_toolsemikar/tools-iuc:gem_toolsCopy head branch name to clipboardDec 13, 2024

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Commits

Commits on Dec 1, 2024

• adding gem_tools

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• added shed.yml file

  emikar

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  85928ae

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• updated to fulfil flake8 requirements

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  e54e3d5

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Commits on Dec 2, 2024

• fixed more flake8 and planemo linting issues

  emikar

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• added profiles and readded .shed.yml with suite configuration

  emikar

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• Update tools/gem_tools/.shed.yml

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• Update tools/gem_tools/.shed.yml

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  emikar

  and

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• fixed shed category

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  committed
  bf586a1

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Commits on Dec 3, 2024

• update cobra version to 0.29.0

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• Update tools/gem_tools/gem_macros.xml

  bgruening

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• update citation to doi

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  emikar

  and

  bgruening

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Commits on Dec 8, 2024

• removed memote python wrapper and did various editorial work involving macros and formatting

  emikar

  committed
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Commits on Dec 9, 2024

• updated macros, descriptions and added input validators

  emikar

  committed
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• narrowed model file format to sbml

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Commits on Dec 12, 2024

• formatting fixes

  emikar

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• fixed escher input logic and tests

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  0b2d938

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