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Mmuphin wrapper#6584

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renu-pal wants to merge 33 commits intogalaxyproject:maingalaxyproject/tools-iuc:mainfrom renu-pal:mmuphin_wrapperrenu-pal/tools-iuc:mmuphin_wrapperCopy head branch name to clipboard

+784

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Commits on Nov 22, 2024

• mmuphin wrapper draft with errors

  renu-pal

  committed
  298cadd

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• Update .shed.yml

  renu-pal

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  ef26199

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Commits on Nov 25, 2024

• removing long description from .shed.yml

  renu-pal

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  801cc88

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• Update tools/mmuphin/macros.xml

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  renu-pal

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  SaimMomin12

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  f0ca96f

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• Update tools/mmuphin/macros.xml

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  renu-pal

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  SaimMomin12

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  c19da4d

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• Update tools/mmuphin/macros.xml

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  renu-pal

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  SaimMomin12

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  52076ec

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• Update tools/mmuphin/macros.xml

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  SaimMomin12

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  bab0879

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• Update tools/mmuphin/macros.xml

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  renu-pal

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  SaimMomin12

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  7c09803

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• Update tools/mmuphin/mmuphin.xml

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  renu-pal

  and

  SaimMomin12

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  f340c26

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• reducing CRC_abd file size and adding adjust_batch.R file

  renu-pal

  committed
  4ee8d65

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• adding long description into .shed.yml due to linting issue

  renu-pal

  authored
  e861c0f

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• Update .shed.yml

  renu-pal

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  f65885e

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• Update .shed.yml

  renu-pal

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  7fafc59

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Commits on Nov 28, 2024

• update

  paulzierep

  committed
  f79c79f

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• update

  paulzierep

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  1b335f1

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• rm unneeded requs

  paulzierep

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  d86e487

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Commits on Nov 29, 2024

• Merge pull request #4 from paulzierep/mmuphin_wrapper

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  renu-pal

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  47d426d

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Commits on Dec 3, 2024

• changing batch value in test, as first column header is null

  renu-pal

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  f815e86

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• removing control_output from test

  renu-pal

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  f36aa66

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• reducing file size

  renu-pal

  committed
  090b476

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Commits on Dec 10, 2024

• Update mmuphin.xml

  renu-pal

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  c5af559

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Commits on Dec 13, 2024

• fixed tests

  paulzierep

  committed
  e60c159

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Commits on Dec 19, 2024

• Merge pull request #5 from paulzierep/mmuphin_wrapper

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  renu-pal

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Commits on Jan 12, 2025

• Update tools/mmuphin/mmuphin.xml

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  renu-pal

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  bgruening

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  7c2d2d7

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Commits on Jan 13, 2025

• getting column names in R directly

  renu-pal

  committed
  c1b167c

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• Apply suggestions from code review

  bgruening

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  550cd60

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• removed unnecessary commented code

  renu-pal

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  8d38c99

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Commits on Jan 14, 2025

• Update tools/mmuphin/mmuphin.xml

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  renu-pal

  and

  bgruening

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  b6e9c39

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• improving help section

  renu-pal

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  5109992

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• Update tools/mmuphin/mmuphin.xml

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  renu-pal

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  bgruening

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Commits on Jan 15, 2025

• removing additional options

  renu-pal

  committed
  19a33c0

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Commits on Jan 16, 2025

• Update tools/mmuphin/mmuphin.xml

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  renu-pal

  and

  paulzierep

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  663287a

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• adding test with covariate=null and few other updates

  renu-pal

  committed
  a139a38

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