More fixes

galaxyproject · Apr 16, 2024 · a9daa58 · a9daa58
1 parent aad1770
commit a9daa58
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/tools/cutadapt/cutadapt.xml b/tools/cutadapt/cutadapt.xml
@@ -137,13 +137,13 @@ $adapter_options.revcomp
     -U $other_trimming_options.cut2
 #end if
 #if str($other_trimming_options.quality_cutoff) != '0':
-    -q $read_mod_options.quality_cutoff
+    -q $other_trimming_options.quality_cutoff
 #end if
 #if $paired and str($other_trimming_options.quality_cutoff2) != '':
     -Q $other_trimming_options.quality_cutoff2
 #end if
 #if str($other_trimming_options.nextseq_trim) != '0':
-    --nextseq-trim $read_mod_options.nextseq_trim
+    --nextseq-trim $other_trimming_options.nextseq_trim
 #end if
 $other_trimming_options.trim_n
 $other_trimming_options.poly_a