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Update seqkit translate (#5921)
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* Add seqkit translate

* Update tools/seqkit/seqkit_translate.xml

Change name into argument

Co-authored-by: Björn Grüning <[email protected]>

* change name by argument and delete help

* Delete test file

* Change tool description and output label

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Co-authored-by: Björn Grüning <[email protected]>
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hugolefeuvre and bgruening authored Apr 2, 2024
1 parent 0ccfadf commit 4e3719a
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tools/seqkit/seqkit_translate.xml
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
<tool id="seqkit_translate" name="SeqKit translate" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
<description>Translate nucleotid sequence to protein sequence</description>
<description>nucleotid to protein sequence</description>
<macros>
<import>macros.xml</import>
</macros>
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<param argument="--init-codon-as-M" type="boolean" truevalue="--init-codon-as-M" falsevalue="" checked="false" label="Translate initial codon at beginning to 'M'" />
</inputs>
<outputs>
<data name="output" format_source="input" label="${input.name} translate (${tool.name})"/>
<data name="output" format_source="input" label="${tool.name} on ${on_string}"/>
</outputs>
<tests>
<!-- 1. fastq -->
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