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update test check in NSSTAT
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nilchia committed Apr 11, 2024
1 parent 9224590 commit 2a8c54c
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions tools/chewbbaca/NSStats.xml
Original file line number Diff line number Diff line change
Expand Up @@ -30,11 +30,12 @@
<data format="txt" name="NSStats" from_work_dir="NSStats.txt" label="${tool.name}"/>
</outputs>
<tests>
<test>
<test expect_exit_code="0">
<param name="mode" value="species" />
<output name="NSStats" file="NSStats.txt" compare="diff">
<output name="NSStats" file="NSStats.txt">
<assert_contents>
<has_text_matching expression="Streptococcus pyogenes"/>
<has_text_matching expression="Salmonella enterica"/>
<has_text_matching expression="Clostridium neonatale"/>
</assert_contents>
</output>
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