Update scanpy with magic-impute functionality (#5866) #12544

Job	Run time
Setup cache and determine changed repositories (3.11)	5m 8s
Lint tool-list (3.11)	2m 19s
Lint R scripts (ubuntu-20.04, release)	2m 8s
Lint Python scripts	0s
Check file sizes	0s
Test tools (0, 3.11)	15m 58s
Test tools (1, 3.11)	12m 31s
Test tools (2, 3.11)	21m 54s
Test tools (3, 3.11)	9m 40s
Combine chunked test results (3.11)	37s
Deploy (3.11)	6m 59s
Check workflow success	0s
Report deploy status	0s
	1h 17m 14s

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