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Use unicodify to deal with potential binary contents #347

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merged 1 commit into from
Nov 22, 2023
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Use unicodify to deal with potential binary contents #347

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10 changes: 6 additions & 4 deletions pulsar/manager_endpoint_util.py
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Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@
import logging
import os

from galaxy.util import unicodify

from pulsar import __version__ as pulsar_version
from pulsar.client.setup_handler import build_job_config
from pulsar.managers import (
Expand Down Expand Up @@ -36,10 +38,10 @@ def __job_complete_dict(complete_status, manager, job_id):
return_code = manager.return_code(job_id)
if return_code == PULSAR_UNKNOWN_RETURN_CODE:
return_code = None
stdout_contents = manager.stdout_contents(job_id).decode("utf-8")
stderr_contents = manager.stderr_contents(job_id).decode("utf-8")
job_stdout_contents = manager.job_stdout_contents(job_id).decode("utf-8")
job_stderr_contents = manager.job_stderr_contents(job_id).decode("utf-8")
stdout_contents = unicodify(manager.stdout_contents(job_id))
stderr_contents = unicodify(manager.stderr_contents(job_id))
job_stdout_contents = unicodify(manager.job_stdout_contents(job_id).decode("utf-8"))
job_stderr_contents = unicodify(manager.job_stderr_contents(job_id).decode("utf-8"))
job_directory = manager.job_directory(job_id)
as_dict = dict(
job_id=job_id,
Expand Down
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