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Update resources (#191)
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Co-authored-by: paulzierep <[email protected]>
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github-actions[bot] and paulzierep authored Oct 9, 2024
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2,944 changes: 1,472 additions & 1,472 deletions communities/all/resources/tools.html

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Expand Up @@ -71,6 +71,7 @@
<th>Source</th>
<th>ToolShed categories</th>
<th>ToolShed id</th>
<th>Date of first commit of the suite</th>
<th>Galaxy wrapper owner</th>
<th>Galaxy wrapper source</th>
<th>Galaxy wrapper parsed folder</th>
Expand Down Expand Up @@ -111,7 +112,6 @@
<th>Tools available on Oqtans</th>
<th>Tools available on Palfinder</th>
<th>Tools available on PepSimili</th>
<th>Tools available on PhagePromotor</th>
<th>Tools available on UseGalaxy.be</th>
<th>Tools available on UseGalaxy.cz</th>
<th>Tools available on UseGalaxy.no</th>
Expand Down Expand Up @@ -152,6 +152,7 @@
<td>https://www.ebi.ac.uk/biomodels/</td>
<td>Machine Learning</td>
<td>biomodels</td>
<td>2023-11-07</td>
<td>bgruening</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/biomodelsML</td>
Expand Down Expand Up @@ -196,7 +197,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>25</td>
<td>25</td>
<td>11</td>
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<td>https://github.com/bgruening/galaxytools/tree/master/tools/chatgpt</td>
<td>Machine Learning</td>
<td>chatgpt_openai_api</td>
<td>2024-08-12</td>
<td>bgruening</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/chatgpt</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/chatgpt</td>
Expand Down Expand Up @@ -275,7 +276,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>62</td>
<td>62</td>
<td>12</td>
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<td>https://github.com/cumbof/chopin2</td>
<td>Machine Learning</td>
<td>chopin2</td>
<td>2023-01-18</td>
<td>iuc</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/master/tools/chopin2</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/main/tools/chopin2</td>
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<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>14</td>
<td>14</td>
<td>6</td>
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<td>https://github.com/cbib/decontaminator</td>
<td>Machine Learning</td>
<td>decontaminator</td>
<td>2023-01-09</td>
<td>iuc</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/master/tools/decontaminator</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/main/tools/decontaminator</td>
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<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>1</td>
<td>0</td>
<td>0</td>
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<td>https://github.com/paulzierep/DeepMicro</td>
<td>Machine Learning</td>
<td>deepmicro</td>
<td>2023-03-16</td>
<td>iuc</td>
<td>https://github.com/paulzierep/DeepMicro</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/main/tools/deepmicro</td>
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<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>1</td>
<td>0</td>
<td>0</td>
Expand Down Expand Up @@ -547,6 +547,7 @@
<td>https://github.com/BIMSBbioinfo/flexynesis/tree/main</td>
<td>Machine Learning, Statistics, Systems Biology</td>
<td>flexynesis</td>
<td>2024-08-12</td>
<td>iuc</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/master/tools/flexynesis</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/flexynesis</td>
Expand Down Expand Up @@ -591,7 +592,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>9</td>
<td>9</td>
<td>2</td>
Expand Down Expand Up @@ -626,6 +626,7 @@
<td>http://scikit-learn.org</td>
<td>Machine Learning, Statistics</td>
<td>sklearn</td>
<td>2021-04-12</td>
<td>bgruening</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/sklearn</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/sklearn</td>
Expand Down Expand Up @@ -666,7 +667,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>29</td>
<td>31</td>
<td>27</td>
Expand Down Expand Up @@ -705,6 +705,7 @@
<td>https://github.com/bgruening/galaxytools</td>
<td>Machine Learning</td>
<td>create_tool_recommendation_model</td>
<td>2019-08-23</td>
<td>bgruening</td>
<td>https://github.com/bgruening/galaxytools/tree/recommendation_training/tools/tool_recommendation_model</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/tool_recommendation_model</td>
Expand Down Expand Up @@ -745,7 +746,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>1</td>
<td>1</td>
<td>1</td>
Expand Down Expand Up @@ -784,6 +784,7 @@
<td>https://github.com/cbib/virhunter</td>
<td>Machine Learning</td>
<td>virhunter</td>
<td>2022-09-13</td>
<td>iuc</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/master/tools/VirHunter</td>
<td>https://github.com/galaxyproject/tools-iuc/tree/main/tools/virhunter</td>
Expand Down Expand Up @@ -825,7 +826,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>1</td>
<td>0</td>
<td>0</td>
Expand Down Expand Up @@ -863,6 +863,7 @@
<td>https://github.com/bgruening/galaxytools/tree/master/tools/whisper</td>
<td>Machine Learning</td>
<td>whisper</td>
<td>2024-04-23</td>
<td>bgruening</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/whisper</td>
<td>https://github.com/bgruening/galaxytools/tree/master/tools/whisper</td>
Expand Down Expand Up @@ -907,7 +908,6 @@
<td>0</td>
<td>0</td>
<td>0</td>
<td>0</td>
<td>96</td>
<td>96</td>
<td>13</td>
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