Skip to content

Commit

Permalink
add assert_contents in test
Browse files Browse the repository at this point in the history
  • Loading branch information
PaulineSGN authored Dec 6, 2024
1 parent 1aef77f commit 4d8522b
Showing 1 changed file with 7 additions and 2 deletions.
9 changes: 7 additions & 2 deletions tools/Ecoregionalization_workflow/indval.xml
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,12 @@
<param name="sign" value="true"/>
<output name="output">
<assert_contents>
<has_size value="4175" delta="50"/>
<has_text text="Multilevel pattern analysis"/>
<has_text text="Association function: IndVal.g"/>
<has_text text="Significance level (alpha): 0.05"/>
<has_text text="Total number of species: 71"/>
<has_text text="Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1"/>
<has_n_lines n="57" delta="3"/>
</assert_contents>
</output>
</test>
Expand Down Expand Up @@ -71,7 +76,7 @@ The second file contains the cluster/sample group assigned to each latitude and
+----------+-----------+----------+
.. class:: infomark
It is preferable to name your columns latitude and longitude in both file as in the examples.
Then you need to indicate wich columns in your occurrence file contain species data. And finally, you have to choose if you want to display only significant results (p-value < 0.05) or if you want all results including no significants ones.
Expand Down

0 comments on commit 4d8522b

Please sign in to comment.