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@esteinig esteinig released this 11 Mar 06:44
· 6 commits to master since this release
20a7530

New release for read trimming and minor updates 🥳

Reads can now be trimmed by a fixed number of bases from the start (--trim-start/-S) and end (--trim-end/-E) [#36]

nanoq -i test.fq -S 100 -E 100 > trim.fq

Read lengths (--read-lengths/-L) and qualities (--read-qualities/-Q) of pass reads can be written to file [#33]

nanoq -i test.fq -Q qual.txt -L len.txt

Other:

  • u32 read length values refactored to usize removing max length limitation on x86_64 [#37]
  • Filtered read count added to report output (--report/-r) [#34]