{ai}[foss/2023a] HNOCA-tools v0.1.1 + GPU version (CUDA-12.1.1)

[pavelToman]

(created using eb --new-pr)
resolves vscentrum/vsc-software-stack#486

[pavelToman]

@boegelbot please test @ jsc-zen3

[boegelbot]

@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=22165 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_22165 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 5540

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
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[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/315a31677692a892d2b8d930a3c1428f for a full test report.

[pavelToman]

Test report by @pavelToman
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node4011.donphan.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6240 CPU @ 2.60GHz, 1 x NVIDIA NVIDIA A2, 545.23.08, Python 3.6.8
See https://gist.github.com/pavelToman/91e34da20718f0b1a26213384ac64f00 for a full test report.

[github-actions]

Updated software HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb

Diff against HNOCA-tools-0.1.1-foss-2023a.eb

easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a.eb

diff --git a/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a.eb b/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb
index f59319c9cf..f58b9b821f 100644
--- a/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a.eb
+++ b/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb
@@ -2,6 +2,7 @@ easyblock = 'PythonBundle'
 
 name = 'HNOCA-tools'
 version = '0.1.1'
+versionsuffix = '-CUDA-%(cudaver)s'
 
 homepage = 'https://github.com/devsystemslab/HNOCA-tools/'
 description = "Toolbox of the Human Neural Organoid Cell Atlas."
@@ -10,14 +11,15 @@ toolchain = {'name': 'foss', 'version': '2023a'}
 
 builddependencies = [('poetry', '1.5.1')]
 dependencies = [
+    ('CUDA', '12.1.1', '', SYSTEM),
     ('Python', '3.11.3'),
     ('SciPy-bundle', '2023.07'),
     ('anndata', '0.10.5.post1'),
     ('scanpy', '1.9.8'),
-    ('scvi-tools', '1.1.2'),
+    ('scvi-tools', '1.1.2', versionsuffix),
     ('statsmodels', '0.14.1'),
     ('matplotlib', '3.7.2'),
-    ('scArches', '0.6.1'),
+    ('scArches', '0.6.1', versionsuffix),
     ('numba', '0.58.1'),
     ('scikit-learn', '1.3.1'),
 ]

Updated software HNOCA-tools-0.1.1-foss-2023a.eb

Diff against HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb

easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb

diff --git a/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb b/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a.eb
index f58b9b821f..f59319c9cf 100644
--- a/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a-CUDA-12.1.1.eb
+++ b/easybuild/easyconfigs/h/HNOCA-tools/HNOCA-tools-0.1.1-foss-2023a.eb
@@ -2,7 +2,6 @@ easyblock = 'PythonBundle'
 
 name = 'HNOCA-tools'
 version = '0.1.1'
-versionsuffix = '-CUDA-%(cudaver)s'
 
 homepage = 'https://github.com/devsystemslab/HNOCA-tools/'
 description = "Toolbox of the Human Neural Organoid Cell Atlas."
@@ -11,15 +10,14 @@ toolchain = {'name': 'foss', 'version': '2023a'}
 
 builddependencies = [('poetry', '1.5.1')]
 dependencies = [
-    ('CUDA', '12.1.1', '', SYSTEM),
     ('Python', '3.11.3'),
     ('SciPy-bundle', '2023.07'),
     ('anndata', '0.10.5.post1'),
     ('scanpy', '1.9.8'),
-    ('scvi-tools', '1.1.2', versionsuffix),
+    ('scvi-tools', '1.1.2'),
     ('statsmodels', '0.14.1'),
     ('matplotlib', '3.7.2'),
-    ('scArches', '0.6.1', versionsuffix),
+    ('scArches', '0.6.1'),
     ('numba', '0.58.1'),
     ('scikit-learn', '1.3.1'),
 ]

[pavelToman]

@boegelbot please test @ jsc-zen3

[boegelbot]

@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=22165 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_22165 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

• exit code: 0
• output:

Submitted batch job 5541

Test results coming soon (I hope)...

- notification for comment with ID 2596043931 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.5, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.21
See https://gist.github.com/boegelbot/8e717cc1a50ef8763000ac0b04900a22 for a full test report.

[pavelToman]

Test report by @pavelToman
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
node4011.donphan.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6240 CPU @ 2.60GHz, 1 x NVIDIA NVIDIA A2, 545.23.08, Python 3.6.8
See https://gist.github.com/pavelToman/57c5a51ed9f0fbd64c553039b652ea44 for a full test report.