update: conda init

creative-connections · Dec 5, 2019 · 7bf61cf · 7bf61cf
1 parent f64b4ec
commit 7bf61cf
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/scripts/bootstrapservices.sh b/scripts/bootstrapservices.sh
@@ -8,18 +8,18 @@ dos2unix /vagrant/scripts/jupyterinapache.sh
 chown -R vagrant:vagrant /home/vagrant
 tail -n +$[LINENO+2] $0 | exec sudo -u vagrant bash                                                                                                                                                                                                     
 exit $? 
+set -x 
 # install pyfmi and mamba
+/home/vagrant/jupyter/bin/conda init
 /home/vagrant/jupyter/bin/conda install -q -y -c conda-forge pyfmi mamba
-
 n=0
 until [ $n -ge 5 ]
 do
    echo "attempting to do mamba install "$n
    /home/vagrant/jupyter/bin/mamba install -q -y -c conda-forge sos sos-pbs sos-notebook jupyterlab-sos sos-bash sos-python && break  # substitute your command here
    n=$[$n+1]
-   sleep 15
+   sleep 2
 done
-
 # install julia dependencies for jupyter (ijulia) and demo notebook using rdatasets
 /home/vagrant/julia-1.3.0/bin/julia -e "using Pkg; Pkg.add(\"IJulia\");Pkg.add(\"RDatasets\");Pkg.add(\"Gadfly\")"
 sudo systemctl stop jupyter