phylogeo-bats-bartonella

Files from McKee et al (2016) IGE - Phylogenetic and geographic patterns of bartonella host shifts among bat species

Data files available upon request

Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
Bartonella alignment (MAFFT L)_combo-OUT.trees.txt		Bartonella alignment (MAFFT L)_combo-OUT.trees.txt
Bartonella tree (ML_GTR+G+I_4).nwk		Bartonella tree (ML_GTR+G+I_4).nwk
Bat alignment (MAFFT L)_combo-OUT.trees.txt		Bat alignment (MAFFT L)_combo-OUT.trees.txt
Bat alt alignment (MAFFT L)_combo-OUT.trees.txt		Bat alt alignment (MAFFT L)_combo-OUT.trees.txt
Bat alt tree (ML_GTR+G+I_4).nwk		Bat alt tree (ML_GTR+G+I_4).nwk
Bat tree (ML_GTR+G+I_4).nwk		Bat tree (ML_GTR+G+I_4).nwk
Bat_polygons.R		Bat_polygons.R
Bat_polygons_alt.R		Bat_polygons_alt.R
Bat_shapefiles.R		Bat_shapefiles.R
Bat_shapefiles_alt.R		Bat_shapefiles_alt.R
Fig1.pdf		Fig1.pdf
Fig2.pdf		Fig2.pdf
Fig3.pdf		Fig3.pdf
Fig4.pdf		Fig4.pdf
Host associations alt.txt		Host associations alt.txt
Host associations.txt		Host associations.txt
HostFam.csv		HostFam.csv
McKee CD et al [2016] Inf Gen Evol.pdf		McKee CD et al [2016] Inf Gen Evol.pdf
McKee_Bats_and_Bartonella_appendixA.pdf		McKee_Bats_and_Bartonella_appendixA.pdf
README.md		README.md
bat_bart_cophylo.R		bat_bart_cophylo.R
overlaparea.csv		overlaparea.csv
overlaparea_alt.csv		overlaparea_alt.csv
resid.vec.csv		resid.vec.csv

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