Quartet MetQC Report

From Quantified Expression Profiles to QC Report

How to run Quartet MetQC Report

see more details on QDP Docs.

Build from source code

Prerequisite

• Bash
• Python3 >= 3.7
• virtualenv
• pip3
• R >= 3.6.3

Installation

# Clone the repo
git clone https://github.com/chinese-quartet/quartet-metqc-report

cd quartet-metqc-report

# Build the environment and compile the quartet-metqc-report
make

Usage

source .env/bin/activate
java -jar target/uberjar/quartet-metqc-report-*-standalone.jar -h

Plugin Mode

Prerequisite

Please access Quartet Service for more details

Installation

copm-cli install -n quartet-metqc-report -V v0.1.2 -d plugins

Examples

...

Contributions

• MetQC developed by Naixin Zhang
• MultiReport developed by Yaqing Liu

License

Copyright © 2021

This program and the accompanying materials are made available under the terms of the Eclipse Public License 2.0 which is available at http://www.eclipse.org/legal/epl-2.0.

This Source Code may also be made available under the following Secondary Licenses when the conditions for such availability set forth in the Eclipse Public License, v. 2.0 are satisfied: GNU General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version, with the GNU Classpath Exception which is available at https://www.gnu.org/software/classpath/license.html.