Fixes

cdisc-org · Oct 17, 2024 · 2dd9ce8 · 2dd9ce8
1 parent ceeb1ff
commit 2dd9ce8
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Showing 5 changed files with 4 additions and 5 deletions.
diff --git a/src/usdm_excel/cross_ref.py b/src/usdm_excel/cross_ref.py
@@ -40,7 +40,6 @@ def get_by_id(self, klass, id):
     if id_key in self._identifiers:
       return self._identifiers[id_key]
     else:
-      self._debug(f"{inspect.stack()[1][3]}")
       self._debug(f"Failed to find by id: klass={self._klass_name(klass)}, id={id}, key={id_key}:\n\n{'':<9}identifiers={self._identifiers.keys()}")
       return None
 

diff --git a/tests/integration_test_files/full_1.json b/tests/integration_test_files/full_1.json
@@ -3644,7 +3644,7 @@
         "organizations": [
           {
             "id": "Organization_6",
-            "name": "European Union",
+            "name": "European Union 1",
             "label": "EU EMA PIP Scheme",
             "type": {
               "id": "Code_61",

diff --git a/tests/integration_test_files/full_1.xlsx b/tests/integration_test_files/full_1.xlsx
diff --git a/tests/integration_test_files/full_1_neo4j_dict.yaml b/tests/integration_test_files/full_1_neo4j_dict.yaml
@@ -5839,7 +5839,7 @@ nodes:
     identifierScheme: EU
     instanceType: Organization
     label: EU EMA PIP Scheme
-    name: European Union
+    name: European Union 1
     uuid: 00000000-0000-4000-8000-000000000435
   - id: Organization_1
     identifier: CT-GOV

diff --git a/tests/test_study_role_sheet.py b/tests/test_study_role_sheet.py
@@ -17,13 +17,13 @@ def test_create(factory, mocker, globals):
   }
   expected_1 = ( '{"id": "AP_1", "name": "AP1", "label": "Lable 1", "description": "Desc One", '
                  '"code": {"id": "C_4", "code": "C25936", "codeSystem": "http://www.cdisc.org", "codeSystemVersion": "2023-12-15", "decode": "Investigator", "instanceType": "Code"}, '
-                 '"appliesToIds": [], "assignedPersons": [], "organizationIds": [], '
+                 '"appliesToIds": [], "assignedPersons": [], "organizationIds": ["O_1"], '
                  '"masking": {"id": "M_1", "description": "Masking 1", "instanceType": "Masking"}, '
                  '"instanceType": "StudyRole"}'
                 )
   expected_2 = ( '{"id": "AP_2", "name": "AP2", "label": "L2", "description": "Desc Two", '
                  '"code": {"id": "C_5", "code": "C70793", "codeSystem": "http://www.cdisc.org", "codeSystemVersion": "2023-12-15", "decode": "Sponsor", "instanceType": "Code"}, '
-                 '"appliesToIds": [], "assignedPersons": [], "organizationIds": [], '
+                 '"appliesToIds": [], "assignedPersons": [], "organizationIds": ["O_2"], '
                  '"masking": {"id": "M_2", "description": "Masking 2", "instanceType": "Masking"}, '
                  '"instanceType": "StudyRole"}'
                 )