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carlocamilloni committed Dec 17, 2024
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| [![Generic badge](https://img.shields.io/badge/6-PDF-<COLOR>.svg)](https://github.com/carlocamilloni/Structural-Bioinformatics/blob/main/Notes/06_QM_MM_more.pdf) | Quantum Chemistry, QM/MM, and simplified models | 11/2024 |
| [![Generic badge](https://img.shields.io/badge/7-PDF-<COLOR>.svg)](https://github.com/carlocamilloni/Structural-Bioinformatics/blob/main/Notes/07_MachineLearning.pdf) | Machine Learning (by [T. Giorgino](https://github.com/giorginolab)) | 12/2024 |
| [![Generic badge](https://img.shields.io/badge/8-PDF-<COLOR>.svg)](https://github.com/carlocamilloni/Structural-Bioinformatics/blob/main/Notes/08_StructurePredictionDocking.pdf) | Structures Prediction and Molecular Docking | 12/2024 |
| [![Generic badge](https://img.shields.io/badge/9-PDF-<COLOR>.svg)](https://github.com/carlocamilloni/Structural-Bioinformatics/blob/main/Notes/09_Integrative_design.pdf) | Integrative Modelling and Protein Design | 01/2024 |
| [![Generic badge](https://img.shields.io/badge/9-PDF-<COLOR>.svg)](https://github.com/carlocamilloni/Structural-Bioinformatics/blob/main/Notes/09_Integrative_design.pdf) | Integrative Modelling and Protein Design | 12/2024 |

### Practicals:

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| T06: Basic DFT simulations | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/t06_QM.ipynb) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/report_6_QM.ipynb) | 10/2024 |
| T07: Protein Structure Prediction | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/t07_StructurePred.ipynb) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/report_7_StructurePred.ipynb) | 10/2024 |
| T08: Molecular Docking | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/t08_docking.ipynb) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/report_8_docking.ipynb) | 10/2024 |
| T09: Protein Design | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/t09_design.ipynb) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/report_9_design.ipynb) | 12/2023 |
| T09: Protein Design | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/t09_design.ipynb) | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/carlocamilloni/Structural-Bioinformatics/blob/main/Notebooks/report_9_design.ipynb) | 12/2024 |

### Reference Papers:
The following publications are to be considered as part of the course and should be studied for the exam.
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