Update all minor versions (master) (minor)

[renovate]

This PR contains the following updates:

Package	Change	Age	Adoption	Passing	Confidence
poetry-dynamic-versioning	==1.4.1 -> ==1.5.0
prospector-profile-duplicated	1.9.0 -> 1.10.4
prospector-profile-duplicated	1.8.1 -> 1.10.4
prospector-profile-utils	1.14.1 -> 1.15.1
puppeteer (source)	23.9.0 -> 23.11.1
scikit-image	0.24.0 -> 0.25.0

---

Release Notes

mtkennerly/poetry-dynamic-versioning (poetry-dynamic-versioning)

v1.5.0

Compare Source

• Added:
  • CLI: When pyproject.toml contains the project section,
    the enable command will add the required fields for Poetry 2.0.0+.
• Fixed:
  • For compatibility with Poetry 2.0.0,
    adjusted Poetry constraint from ^1.2.0 to >=1.2.0.
  • For compatibility with Poetry 2.0.0,
    when inserting the dynamic version into pyproject.toml with PEP 621 mode activated,
    the plugin ensures not to set project.version and tool.poetry.version at the same time.
  • An UnboundLocalError could happen when pyproject.toml was misconfigured.

sbrunner/prospector-profile-duplicated (prospector-profile-duplicated)

v1.10.4

Compare Source

1.10.4 (2025-01-04)

Fixed bugs

• #​110 Fix ast.literal_eval (@​sbrunner)

v1.10.3

Compare Source

1.10.3 (2025-01-04)

Fixed bugs

• #​109 Fix extra dash (@​sbrunner)

v1.10.2

Compare Source

1.10.2 (2025-01-04)

New feature

• #​108 Remove duplicated for ast.literal_eval (@​sbrunner)

v1.10.1

Compare Source

1.10.1 (2025-01-04)

New feature

• #​107 Update duplicated with Ruff (@​sbrunner)

Dependency update

• #​105 Update pre-commit hook renovatebot/pre-commit-hooks to v39.86.3 (@​renovate[bot], @​geo-ghci-int[bot])
• #​106 Update pre-commit hook sbrunner/jsonschema-validator to v1 (@​renovate[bot], @​geo-ghci-int[bot])
• #​104 Update CI dependencies (patch) (@​renovate[bot], @​geo-ghci-int[bot])

v1.10.0

Compare Source

1.10.0 (2024-12-30)

New feature

• #​103 Add more codestyle ignore with Black (@​sbrunner)

sbrunner/prospector-profile-utils (prospector-profile-utils)

v1.15.1

Compare Source

1.15.1 (2025-01-04)

Fixed bugs

• #​100 Fix less doc string (@​sbrunner)

v1.15.0

Compare Source

1.15.0 (2025-01-04)

New feature

• #​99 Less doc string (@​sbrunner)
• #​95 Disable all shorthand (@​sbrunner)

Dependency update

• #​98 Update pre-commit hook sbrunner/jsonschema-validator to v1 (@​renovate[bot], @​geo-ghci-int[bot])
• #​96 Update CI dependencies (patch) (@​renovate[bot], @​geo-ghci-int[bot])
• #​97 Update pre-commit hook renovatebot/pre-commit-hooks to v39.86.3 (@​renovate[bot], @​geo-ghci-int[bot])

puppeteer/puppeteer (puppeteer)

v23.11.1: puppeteer: v23.11.1

Compare Source

Miscellaneous Chores

• puppeteer: Synchronize puppeteer versions

Dependencies

• The following workspace dependencies were updated
  • dependencies
    • puppeteer-core bumped from 23.11.0 to 23.11.1

v23.11.0: puppeteer: v23.11.0

Compare Source

Bug Fixes

• deps: bump chromium-bidi to 0.11.0 (#​13418) (771e4b2)

Dependencies

• The following workspace dependencies were updated
  • dependencies
    • puppeteer-core bumped from 23.10.4 to 23.11.0

v23.10.4: puppeteer-core: v23.10.4

Compare Source

Bug Fixes

• roll to Chrome 131.0.6778.108 (#​13395) (cc1aa16)
• roll to Firefox 133.0.3 (#​13399) (a163cbf)

v23.10.3: puppeteer: v23.10.3

Compare Source

Dependencies

• The following workspace dependencies were updated
  • dependencies
    • @​puppeteer/browsers bumped from 2.6.0 to 2.6.1
    • puppeteer-core bumped from 23.10.2 to 23.10.3

v23.10.2: puppeteer: v23.10.2

Compare Source

Miscellaneous Chores

• puppeteer: Synchronize puppeteer versions

Dependencies

• The following workspace dependencies were updated
  • dependencies
    • @​puppeteer/browsers bumped from 2.5.0 to 2.6.0
    • puppeteer-core bumped from 23.10.1 to 23.10.2

v23.10.1

Compare Source

v23.10.0

Compare Source

scikit-image/scikit-image (scikit-image)

v0.25.0

Compare Source

scikit-image 0.25.0

We're happy to announce the release of scikit-image 0.25.0!

New Features

• Add the new Gray-Level Co-occurrence Matrix (GLCM) properties "mean", "variance", "standard deviation" and "entropy" to skimage.feature.texture.graycoprops (#​7375).
• Add the new skimage.morphology.footprint_rectangle supporting generation of rectangular or hyper-rectangular footprints in one function (#​7566).

API Changes

• Complete the deprecation of and remove skimage.feature.plot_matches. Use skimage.feature.plot_matched_features going forward (#​7487).
• Deprecate skimage.io.imshow, skimage.io.imshow_collection and skimage.io.show. Please use matplotlib, napari, etc. to visualize images (#​7508).
• Remove deprecated skimage.morphology.skeletonize_3d; use skimage.morphology.skeletonize instead (#​7572).
• Deprecate skimage.io plugin infrastructure (#​7353).
• Switched to using the scipy.sparse array interface. For more details, see the note about the new scipy.sparse array interface here (#​7576).
• Deprecate skimage.morphology.rectangle in favor of the new function skimage.morphology.footprint_rectangle (#​7566).
• Deprecate skimage.morphology.square in favor of the new function skimage.morphology.footprint_rectangle (#​7566).
• Deprecate skimage.morphology.cube in favor of the new function skimage.morphology.footprint_rectangle (#​7566).

Enhancements

• Improve numerical stability of skimage.morphology.local_minima for extremely small floats (#​7534).
• Make sure that skimage.feature.plot_matched_features uses the same random colors, if matches_color isn't provided explicitly (#​7541).
• Allow passing a sequence of colors to the parameter matches_color in skimage.feature.plot_matched_features (#​7541).

Performance

• skimage.feature.peak_local_max will now skip unnecessary distance computations in the case of min_distance=1. This results in performance improvements to functions like skimage.feature.blob_dog, skimage.feature.blob_log, skimage.feature.blob_doh and skimage.feature.corner_peaks that call peak_local_max internally (#​7548).
• In skimage.featurepeak_local_max, skip unnecessary check for cases where min_distance > 1 is passed (#​7548).

Bug Fixes

• Ensure that skimage.morphology.remove_objects_by_distance doesn't fail if the given integer dtype cannot be safely cast to the architecture specific size of intp, e.g. on i386 architectures (#​7453).
• Fix degeneracy in skimage.draw.ellipsoid_stats when all semi-axes have the same length (#​7473).
• Prevent skimage.morphology.thin from accidentally modifying the input image in case it is of dtype uint8 (#​7469).
• Fix numerical precision error in skimage.measure.ransac. In some cases, ransac was stopping at the first iteration (#​7065).
• Fix numerical precision error in skimage.measure.ransac; very small probabilities lead to -0 number of max trials (#​7496).
• Ensure that RegionProperties objects returned by skimage.measure.regionprops can be deserialized with pickle (#​7569).
• Fix edge case where setting watershed_lines=True in skimage.segmentation.watershed resulted in an incorrect solution (#​7071).
• Fix the behavior of skimage.segmentation.watershed when the markers don't align with local minima by making sure every marker is evaluated before successive pixels (#​7071).
• Fix dtype promotion in skimage.segmentation.join_segmentations if numpy.uint is used with NumPy<2 (#​7292).

Documentation

• In skimage.morphology.skeletonize, clarify the expected image dtypes and how objects of different intensities are handled (#​7456).
• Fix example section in docstring of skimage.feature.graycomatrix (#​7297).
• Use conda-forge consistently in instructions for setting up the development environment (#​7483).
• Use new CITATION.cff instead of CITATION.bib (#​7505).
• Use correct spin test --coverage in contribution guide (#​7515).
• Tweak advice to new developers; remove AI warning (#​7522).
• Rework installation instructions (#​7434).
• Improve the description of the image parameter in skimage.restoration.richardson_lucy (#​7477).
• Account for empty arrays when counting segments per contour level in gallery example "Segment human cells (in mitosis)" (#​7551).
• Fix typo in morphology doc (#​7606).
• Change type description of parameter radius in skimage.morphology.ball from int to float (#​7627).

Infrastructure

• Fix CI tests with minimal dependencies and make dependency resolution more robust (#​7462).
• Add CI to test scikit-image against free-threaded Python 3.13 (#​7463).
• Address autosummary.import_cycle warning (#​7486).
• Temporarily exclude Dask 2024.8.0 to fix CI (#​7493).
• Uncomment currentmodule directive again (#​7492).
• Add CI to release nightly free-threaded wheels (#​7481).
• Update deprecated configuration (#​7501).
• Bump spin version to 0.11 (#​7507).
• Ensure only a single type: label is present in PRs (#​7512).
• Update pydata-sphinx-theme (#​7511).
• Fix OpenBLAS s_cmp unresolved symbol error, update Emscripten CI testing (#​7525).
• Render paragraphs in dormant message (#​7549).
• Build sphinx documentation with parallel jobs (#​7579).
• Don't check test coverage in CI (#​7594).
• Explicitly setup conda on macos for wheel building (#​7608).

Maintenance

• Verify all artifacts that have been attested by looping over them in CI (#​7447).
• Update circleci-artifacts-redirector-action that moved to the Scientific Python org (#​7446).
• Use NumPy 2.0 stable to build packages (#​7451).
• FIX Use python3 in Meson version script shebang (#​7482).
• Refactored tests for skeletonize (#​7459).
• Remove unused and deprecated dependency pytest-runner (#​7495).
• Exclude imageio 2.35.0 that forces numpy downgrade (#​7502).
• Don't test thresholding funcs for Dask compatibility (#​7509).
• Fix build dependency (#​7510).
• Add sdist check to spin sdist (#​7438).
• Reorder items in TODO list (#​7519).
• Use Rotation.from_euler to compute 3D rotation matrix (#​7503).
• Update spin (0.12) (#​7532).
• Import lazy_loader as private symbol in top-level namespaces (#​7540).
• Set -DNPY_NO_DEPRECATED_API=NPY_1_23_API_VERSION on build (#​7538).
• Update up/download artifact version (#​7545).
• Don't use deprecated io.show and io.imshow (#​7556).
• Hide traceback inside assert_stacklevel (#​7558).
• Update pre-commit versions (#​7560).
• Drop Python 3.9 support (#​7561).
• Update minimum dependencies (SPEC 0) (#​7562).
• Remove unused PYX files in io/_plugins (#​7557).
• Support Python 3.13 (#​7565).
• During deprecation cycles, preserve the value of deprecated parameters that don't have a new parameter as a replacement (#​7552).
• Fix missing minigalleries by using full names in directives (#​7567).
• Build Python 3.13 wheels (#​7571).
• Update TODO (#​7573).
• Remove deprecated gaussian output parameter (#​7574).
• Test Py3.13 on windows (#​7578).
• Update ruff linter / formatter (#​7580).
• Fix formatting issues (#​7581).
• CI: bump macos image pin from 12 to 13 (#​7582).
• Update build dependencies (#​7587).
• Update minimum supported pyamg (#​7586).
• Update documentation dependencies (#​7590).
• Bump changelist to v0.5 (#​7601).
• Pin kaleido to 0.2.1 (#​7612).
• Update upload-nightly-action (#​7609).
• Update pillow (#​7615).
• Remove Python 2.7 cruft (#​7616).
• Use intersphinx_registry package in conf.py to keep intersphinx urls up to date. This means that building docs now requires the intersphinx-registry package (#​7611).
• Update build dependencies (#​7614).
• Update file extension and reformat Markdown file (#​7617).
• Add forgotten TODO about deprecated square, cube & rectangle (#​7624).
• Upgrade to spin 0.13 (#​7622).
• Lazy load legacy imports in skimage top module (#​6892).
• CI pre-commit fix (#​7631).

Contributors

30 authors added to this release (alphabetically):

• @​aeisenbarth
• @​FedericoWZhaw
• @​jakirkham
• @​michaelbratsch
• Adeyemi Biola (@​decorouz)
• Aditi Juneja (@​Schefflera-Arboricola)
• Agriya Khetarpal (@​agriyakhetarpal)
• Brigitta Sipőcz (@​bsipocz)
• Dan Schult (@​dschult)
• Edgar Andrés Margffoy Tuay (@​andfoy)
• Egor Panfilov (@​soupault)
• Erik Welch (@​eriknw)
• Gianluca (@​geeanlooca)
• Gregory Lee (@​grlee77)
• Hayato Ikoma (@​hayatoikoma)
• Henrik Finsberg (@​finsberg)
• Jarrod Millman (@​jarrodmillman)
• Jordão Bragantini (@​JoOkuma)
• João Seródio (@​SerodioJ)
• Kushaan Gupta (@​kushaangupta)
• Lars Grüter (@​lagru)
• Loïc Estève (@​lesteve)
• M Bussonnier (@​Carreau)
• Marianne Corvellec (@​mkcor)
• Mark Harfouche (@​hmaarrfk)
• Matthew Feickert (@​matthewfeickert)
• Paritosh Dahiya (@​hnhparitosh)
• Piyush Amitabh (@​pamitabh)
• Ricky Walsh (@​rickymwalsh)
• Stefan van der Walt (@​stefanv)

25 reviewers added to this release (alphabetically):

• @​aeisenbarth
• @​FedericoWZhaw
• @​jakirkham
• @​michaelbratsch
• Agriya Khetarpal (@​agriyakhetarpal)
• Brigitta Sipőcz (@​bsipocz)
• Dan Schult (@​dschult)
• Edgar Andrés Margffoy Tuay (@​andfoy)
• Egor Panfilov (@​soupault)
• Gianluca (@​geeanlooca)
• Gregory Lee (@​grlee77)
• Hayato Ikoma (@​hayatoikoma)
• Jarrod Millman (@​jarrodmillman)
• Jordão Bragantini (@​JoOkuma)
• João Seródio (@​SerodioJ)
• Juan Nunez-Iglesias (@​jni)
• Kushaan Gupta (@​kushaangupta)
• Lars Grüter (@​lagru)
• Marianne Corvellec (@​mkcor)
• Mark Harfouche (@​hmaarrfk)
• Matthew Feickert (@​matthewfeickert)
• Nathan Goldbaum (@​ngoldbaum)
• Piyush Amitabh (@​pamitabh)
• Ralf Gommers (@​rgommers)
• Stefan van der Walt (@​stefanv)

These lists are automatically generated, and may not be complete or may contain duplicates.

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