remove extra folder

broadinstitute · Nov 8, 2021 · 51555be · 51555be
1 parent e74dec3
commit 51555be
Showing 1 changed file with 8 additions and 11 deletions.
diff --git a/reasonerAPI/README.md b/reasonerAPI/README.md
@@ -4,18 +4,13 @@
 
 Package transformer itself
 ```
-cd transformers/reasonerAPI/python-flask-server
-python setup.py bdist_wheel
-```
-Package transformer base class
-```
-cd util/python/
+cd reasonerAPI/python-flask-server
 python setup.py bdist_wheel
 ```
 
 ### Copy files to server
 
-copy `transformers/reasonerAPI/python-flask-server/dist/molepro_trapi-1.2.1.1-py3-none-any.whl` to the target folder
+copy `reasonerAPI/python-flask-server/dist/molepro_trapi-1.2.1.1-py3-none-any.whl` to the target folder
 
 
 ### Install transformer on server
@@ -27,15 +22,17 @@ pip install -I molepro_trapi-1.2.1.1-py3-none-any.whl
 pip install gunicorn
 pip install "connexion[swagger-ui]"
 deactivate
+```
+
+### Launch transformer
+
 ```
 set environment variable MOLEPRO_QUERY_LIMIT 1000
-set environment variable MOLEPRO_PORT 9220
+set environment variable MOLEPRO_PORT <port#>
 set environment variable MOLEPRO_BASE_URL https://molepro.ci.transltr.io/molecular_data_provider
 set environment variable MOLEPRO_URL_BIOLINK https://bl-lookup-sri.renci.org/bl
 set environment variable MOLEPRO_URL_TRANSFORMERS https://molepro.ci.transltr.io/molecular_data_provider/transformers
-
-
-### Launch transformer
+```
 
 ```
 mkdir logs