Update samtools container image to 1.20--h50ea8bc_0.

bigdatagenomics · Apr 19, 2024 · a5ed768 · a5ed768
1 parent a231ce4
commit a5ed768
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/core/src/main/scala/org/bdgenomics/cannoli/SamtoolsMpileup.scala b/core/src/main/scala/org/bdgenomics/cannoli/SamtoolsMpileup.scala
@@ -36,8 +36,8 @@ class SamtoolsMpileupArgs extends Args4jBase {
   @Args4jOption(required = false, name = "-executable", usage = "Path to the samtools executable. Defaults to samtools.")
   var executable: String = "samtools"
 
-  @Args4jOption(required = false, name = "-docker_image", usage = "Container image to use. Defaults to quay.io/biocontainers/samtools:1.19--h50ea8bc_0.")
-  var image: String = "quay.io/biocontainers/samtools:1.19--h50ea8bc_0"
+  @Args4jOption(required = false, name = "-docker_image", usage = "Container image to use. Defaults to quay.io/biocontainers/samtools:1.20--h50ea8bc_0.")
+  var image: String = "quay.io/biocontainers/samtools:1.20--h50ea8bc_0"
 
   @Args4jOption(required = false, name = "-sudo", usage = "Run via sudo.")
   var sudo: Boolean = false