-
Notifications
You must be signed in to change notification settings - Fork 234
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Updating tools/flexynesis from version 0.2.10 to 0.2.12 #1563
Updating tools/flexynesis from version 0.2.10 to 0.2.12 #1563
Conversation
@nilchia is that ok? |
@bgruening No I have to add XGBoost and fix some tests. Working on it. |
@bgruening Can you please give me access to this repo so I can push my changes? |
Done. But please note, that you can always push to your repo and make a PR against the bot repo or a new PR. |
Thanks! |
add XGBoost and tests
Yes it is! |
<has_text_matching expression="DirectPred,Erlotinib,numerical,mse,"/> | ||
<has_text_matching expression="DirectPred,Erlotinib,numerical,r2,"/> | ||
<has_text_matching expression="DirectPred,Erlotinib,numerical,pearson_corr,"/> | ||
<has_text_matching expression="GNN,Erlotinib,numerical,mse,"/> |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Why did it change from DirectPred to GNN?
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
This one is correct actually. In the previous test <param name="model_class" value="GNN"/>
was not enclosed within the <conditional name="model_class">
and </conditional>
, and instead of GNN, the default model (DirectPred) was called.
The other tests are correct.
Hello! This is an automated update of the following tool: tools/flexynesis. I created this PR because I think the tool's main dependency is out of date, i.e. there is a newer version available through conda.
I have updated tools/flexynesis from version 0.2.10 to 0.2.12.
Project home page: https://github.com/BIMSBbioinfo/flexynesis/tree/main/releases
For any comments, queries or criticism about the bot, not related to the tool being updated in this PR, please create an issue here.
If you want to skip this change, close this PR without deleting the branch. It will be reopened if another change is detected.
Any commit from another author than 'planemo-autoupdate' will prevent more auto-updates.
To ignore manual changes and allow autoupdates, delete the branch.