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Gfastats - correct format issue (#1558)
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* Bump wrapper version

* replace format text by txt
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Delphine-L authored Dec 12, 2024
1 parent fdbd4a8 commit 5ab6f94
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4 changes: 2 additions & 2 deletions tools/gfastats/gfastats.xml
Original file line number Diff line number Diff line change
Expand Up @@ -111,7 +111,7 @@
</param>
<when value="manipulation">
<param argument="--swiss-army-knife" type="data"
format="text" label="SAK input file" optional="true"
format="txt" label="SAK input file" optional="true"
help="Set of instructions provided as an ordered list"/>
<conditional name="output_condition">
<param argument="--out-format" type="select"
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<data name="stats" format="tabular" label="${tool.name} on ${on_string}: stats">
<filter>mode_condition['selector'] == 'statistics'</filter>
<change_format>
<when input="tabular" value="false" format="text"/>
<when input="tabular" value="false" format="txt"/>
</change_format>
</data>
<data name="output" format="fastq" from_work_dir="output_dataset" label="${tool.name} on ${on_string}: edited sequences">
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2 changes: 1 addition & 1 deletion tools/gfastats/macros.xml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
<macros>
<token name="@TOOL_VERSION@">1.3.9</token>
<token name="@SUFFIX_VERSION@">0</token>
<token name="@SUFFIX_VERSION@">1</token>
<xml name="requirements">
<requirements>
<requirement type="package" version="@TOOL_VERSION@">gfastats</requirement>
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