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small modification
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rlibouba committed Feb 14, 2024
1 parent 1a5d374 commit f11d3cb
Showing 1 changed file with 10 additions and 2 deletions.
12 changes: 10 additions & 2 deletions tools/compleasm/compleasm.xml
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
<tool id="compleasm" name="compleasm" version="@TOOL_VERSION@+galaxy0" profile="20.01">
<description>evaluate the completeness of genome assemblies</description>
<description>completeness of genome assemblies</description>
<macros>
<import>macros.xml</import>
</macros>
Expand All @@ -24,8 +24,16 @@
<option value="busco" selected="true">BUSCO</option>
<option value="lite">Lite</option>
</param>
<param argument="--specified_contigs" type="text" label="Specify the contigs to be evaluated" optional="true" help="e.g. chr1 chr2 chr3. If not specified, all contigs will be evaluated"/>

<param argument="--specified_contigs" type="text" label="Specify the contigs to be evaluated" optional="true" help="e.g. chr1 chr2 chr3. If not specified, all contigs will be evaluated">
<sanitizer invalid_char="">
<valid initial="string.letters,string.digits">
<add value="_" />
</valid>
</sanitizer>
<validator type="regex">[0-9a-zA-Z_ ]+</validator>
</param>

<param name="outputs" type="select" multiple="true" label="Which outputs should be generated">
<option value="full_table_busco" selected="true">full busco table</option>
<option value="full_table">full table</option>
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