fixes #16

	# Continuous integration test of any branch.

	name: CI
	on:
	push:
	branches-ignore:
	- main

	jobs:
	# Run Python tests on Github runner
	run_tox_test:
	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: [3.9]

	steps:
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v2
	with:
	python-version: ${{ matrix.python-version }}

	- name: Checkout github repo
	uses: actions/checkout@v2
	with:
	submodules: recursive

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r requirements.txt
	$CONDA/bin/conda install -y -c bioconda womtool
	$CONDA/bin/conda config --add channels conda-forge
	$CONDA/bin/conda install -y -c conda-forge miniwdl shellcheck
	echo "$CONDA/bin" >> $GITHUB_PATH

	- name: Test with tox
	run: tox

	# Build Docker image
	build_docker_images:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout github repo
	uses: actions/checkout@v2
	with:
	submodules: recursive

	- id: 'auth'
	name: 'Authenticate to Google Cloud'
	uses: 'google-github-actions/auth@v0'
	with:
	credentials_json: '${{ secrets.GOOGLE_CREDENTIALS }}'

	- name: Build Docker images
	run: \|-
	gcloud config set account [email protected]
	gcloud auth configure-docker -q us-central1-docker.pkg.dev
	./scripts/build_docker_images.sh $(git rev-parse --abbrev-ref HEAD)

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