graphcast hub

jupyter-images/fall-2024/tm/Dockerfile

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+# Heavily borrowed from docker-stacks/minimal-notebook/
+# https://github.com/jupyter/docker-stacks/blob/main/minimal-notebook/Dockerfile
+
+ARG BASE_CONTAINER=jupyter/minimal-notebook
+FROM $BASE_CONTAINER
+
+ENV DEFAULT_ENV_NAME=tm-fall-2024 EDITOR=nano VISUAL=nano
+
+LABEL maintainer="Unidata <[email protected]>"
+
+USER root
+
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends vim nano curl zip unzip && \
+    apt-get clean && \
+    rm -rf /var/lib/apt/lists/*
+
+USER $NB_UID
+
+ADD environment.yml /tmp
+
+RUN conda install --quiet --yes \
+      'conda-forge::nb_conda_kernels' \
+      'conda-forge::jupyterlab-git' \
+      'conda-forge::ipywidgets' && \
+    conda env update --name $DEFAULT_ENV_NAME -f /tmp/environment.yml && \
+    pip install --no-cache-dir nbgitpuller && \
+    conda clean --all -f -y && \
+    jupyter lab clean -y && \
+    npm cache clean --force && \
+    rm -rf /home/$NB_USER/.cache/yarn && \
+    rm -rf /home/$NB_USER/.node-gyp && \
+    fix-permissions $CONDA_DIR && \
+    fix-permissions /home/$NB_USER
+
+COPY Acknowledgements.ipynb /
+
+USER $NB_UID

jupyter-images/fall-2024/tm/environment.yml

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+name: tm-fall-2024
+channels:
+ - nvidia
+ - pytorch
+ - defaults
+ - conda-forge
+dependencies:
+  # Required by JupyterLab
+  - python=3.10
+  - nb_conda_kernels
+  - ipykernel
+  - notebook
+  - jupyter_server
+  # User requested packages
+  - cartopy
+  - cudatoolkit
+  - ipywidgets
+  - matplotlib
+  - metpy
+  - numpy
+  - pandas
+  - pip
+  - pytorch-cuda=12.1
+  - scikit-learn
+  - seaborn
+  - siphon
+  - xarray
+  - pip:
+    - ai-models-fourcastnetv2

jupyter-images/fall-2024/tm/secrets.yaml

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+hub:
+  cookieSecret: "xxx"
+  config:
+    Authenticator:
+      admin_users:
+        - admins
+      #If you have a large list of users, consider using allowed_users.yaml
+      allowed_users:
+        - users
+      # necessary for jhub admins to add user via admin page `<url>/hub/admin`
+      allow_existing_users: true
+    GitHubOAuthenticator:
+      client_id: "xxx"
+      client_secret: "xxx"
+      oauth_callback_url: "https://tm24f-1.ees220002.projects.jetstream-cloud.org:443/oauth_callback"
+    JupyterHub:
+      authenticator_class: github
+
+proxy:
+  secretToken: "xxx"
+
+ingress:
+  enabled: true
+  annotations:
+    kubernetes.io/ingress.class: "nginx"
+    cert-manager.io/cluster-issuer: "letsencrypt"
+    #For manually issuing certificates: see vms/jupyter/readme.md
+    #cert-manager.io/issuer: "incommon"
+    nginx.ingress.kubernetes.io/proxy-body-size: 500m
+  hosts:
+      - "tm24f-1.ees220002.projects.jetstream-cloud.org"
+  tls:
+      - hosts:
+         - "tm24f-1.ees220002.projects.jetstream-cloud.org"
+        secretName: certmanager-tls-jupyterhub
+
+singleuser:
+  extraEnv:
+    NBGITPULLER_DEPTH: "0"
+  storage:
+    capacity: 10Gi
+  startTimeout: 600
+  memory:
+    guarantee: 4G
+    limit: 4G
+  cpu:
+    guarantee: 1
+    limit: 2
+  defaultUrl: "/lab"
+  image:
+    name: "unidata/tm24f"
+    tag: "xxx"
+  lifecycleHooks:
+    postStart:
+      exec:
+          command:
+            - "bash"
+            - "-c"
+            - >
+              dir="/home/jovyan/.ssh"; [ -d $dir ] && { chmod 700 $dir && chmod -f 600 $dir/* && chmod -f 644 $dir/*.pub; } || true;
+              cp -t /home/jovyan /Acknowledgements.ipynb;
+              [[ -f $HOME/.bashrc ]] || cp /etc/skel/.bashrc $HOME/;
+              [[ -f $HOME/.profile ]] || cp /etc/skel/.profile $HOME/;
+              [[ -f $HOME/.bash_logout ]] || cp /etc/skel/.bash_logout $HOME/;
+              [[ -f $HOME/.condarc ]] || cp /.condarc $HOME/;
+              [ -d "/share" ] && [ ! -L ~/share ] && ln -s /share ~/share || true;