DRAFT: ASV Benchmark for High Resolution MPAS Atmosphere Grids

[philipc2]

Closes #956

Overview

[github-actions]

ASV Benchmarking

Benchmark Comparison Results

Benchmarks that have improved:

Change	Before [f50e4bb]	After [6a509e3]	Ratio	Benchmark (Parameter)
-	406M	354M	0.87	mpas_ocean.Integrate.peakmem_integrate('480km')

Benchmarks that have stayed the same:

Change	Before [f50e4bb]	After [6a509e3]	Ratio	Benchmark (Parameter)
	failed	failed	n/a	face_bounds.Bounds.time_bounds
	383M	383M	1.00	face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc'))
	384M	385M	1.00	face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc'))
	383M	387M	1.01	face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc'))
	382M	386M	1.01	face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc'))
	1.56±0.01s	1.60±0s	1.03	face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc'))
	225±0.1ms	226±1ms	1.01	face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc'))
	2.00±0s	2.04±0s	1.02	face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc'))
	7.73±0.1ms	7.58±0.04ms	0.98	face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc'))
	1.72±0.03s	1.75±0.01s	1.01	import.Imports.timeraw_import_uxarray
	643±4ms	657±8ms	1.02	mpas_ocean.ConnectivityConstruction.time_face_face_connectivity('120km')
	40.7±0.7ms	42.1±0.4ms	1.03	mpas_ocean.ConnectivityConstruction.time_face_face_connectivity('480km')
	1.84±0.01ms	1.87±0.05ms	1.02	mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face('120km')
	495±10μs	497±20μs	1.00	mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face('480km')
	1.35±0.01μs	1.32±0.01μs	0.98	mpas_ocean.ConstructTreeStructures.time_ball_tree('120km')
	320±8ns	316±10ns	0.99	mpas_ocean.ConstructTreeStructures.time_ball_tree('480km')
	812±10ns	831±4ns	1.02	mpas_ocean.ConstructTreeStructures.time_kd_tree('120km')
	296±1ns	288±7ns	0.97	mpas_ocean.ConstructTreeStructures.time_kd_tree('480km')
	402M	402M	1.00	mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('120km', False)
	391M	391M	1.00	mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('120km', True)
	362M	362M	1.00	mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('480km', False)
	361M	361M	1.00	mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('480km', True)
	1.03±0.01s	1.04±0s	1.01	mpas_ocean.GeoDataFrame.time_to_geodataframe('120km', False)
	58.0±1ms	57.0±0.5ms	0.98	mpas_ocean.GeoDataFrame.time_to_geodataframe('120km', True)
	79.1±2ms	78.0±0.7ms	0.99	mpas_ocean.GeoDataFrame.time_to_geodataframe('480km', False)
	5.71±0.2ms	5.40±0.2ms	0.95	mpas_ocean.GeoDataFrame.time_to_geodataframe('480km', True)
	265M	263M	0.99	mpas_ocean.Gradient.peakmem_gradient('120km')
	241M	241M	1.00	mpas_ocean.Gradient.peakmem_gradient('480km')
	2.68±0.01ms	2.68±0.02ms	1.00	mpas_ocean.Gradient.time_gradient('120km')
	287±1μs	286±2μs	1.00	mpas_ocean.Gradient.time_gradient('480km')
	225±10μs	242±10μs	1.08	mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices('120km')
	121±0.4μs	120±0.8μs	1.00	mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices('480km')
	370M	371M	1.00	mpas_ocean.Integrate.peakmem_integrate('120km')
	179±2ms	177±0.6ms	0.98	mpas_ocean.Integrate.time_integrate('120km')
	11.8±0.5ms	12.0±0.02ms	1.02	mpas_ocean.Integrate.time_integrate('480km')
	346±3ms	347±0.8ms	1.00	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'exclude')
	345±1ms	346±3ms	1.00	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'include')
	349±4ms	345±3ms	0.99	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'split')
	22.3±0.3ms	22.8±0.3ms	1.02	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'exclude')
	22.6±0.3ms	22.3±0.5ms	0.99	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'include')
	22.9±0.5ms	22.5±0.5ms	0.98	mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'split')
	54.8±0.2ms	54.7±0.1ms	1.00	mpas_ocean.RemapDownsample.time_inverse_distance_weighted_remapping
	44.4±0.1ms	44.3±0.1ms	1.00	mpas_ocean.RemapDownsample.time_nearest_neighbor_remapping
	360±1ms	359±0.5ms	1.00	mpas_ocean.RemapUpsample.time_inverse_distance_weighted_remapping
	264±1ms	263±0.6ms	1.00	mpas_ocean.RemapUpsample.time_nearest_neighbor_remapping
	239M	237M	0.99	quad_hexagon.QuadHexagon.peakmem_open_dataset
	237M	236M	1.00	quad_hexagon.QuadHexagon.peakmem_open_grid
	6.50±0.04ms	6.62±0.04ms	1.02	quad_hexagon.QuadHexagon.time_open_dataset
	5.61±0.09ms	5.62±0.08ms	1.00	quad_hexagon.QuadHexagon.time_open_grid