Added documentation to anndata.automatic_expression_histology

Teichlab · Sep 9, 2018 · b5e80b5 · b5e80b5
1 parent 8318a3c
commit b5e80b5
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/Python-module/SpatialDE/anndata.py b/Python-module/SpatialDE/anndata.py
@@ -72,9 +72,14 @@ def automatic_expression_histology(adata, filtered_results, C, l,
 
     l: float, the common lengthscale for the hidden spatial patterns.
 
+    coord_columns: A list with the columns of adata.obs which represent spatial
+                   coordinates. Default ['x', 'y'].
+
     layer: A string indicating the layer of adata to fit the AEH model to.
            By defualt uses the 'residual' layer.
 
+    Remaining arguments are passed to SpatialDE.aeh.spatial_patterns()
+
     Returns
     -------