move files in /petagraph to Scientific_Data_2024/

TaylorResearchLab · Nov 26, 2024 · 588a491 · 588a491
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diff --git a/petagraph/GENCODEHSCLO.md → Scientific_Data_2024/GENCODEHSCLO.md b/petagraph/GENCODEHSCLO.md → Scientific_Data_2024/GENCODEHSCLO.md
diff --git a/petagraph/README.md → Scientific_Data_2024/README.md b/petagraph/README.md → Scientific_Data_2024/README.md
diff --git a/...de/build_scripts/OWLNETS-UMLS-GRAPH-12.py → ...de/build_scripts/OWLNETS-UMLS-GRAPH-12.py b/...de/build_scripts/OWLNETS-UMLS-GRAPH-12.py → ...de/build_scripts/OWLNETS-UMLS-GRAPH-12.py
diff --git a/...ph/code/build_scripts/ingest_petagraph.sh → ...24/code/build_scripts/ingest_petagraph.sh b/...ph/code/build_scripts/ingest_petagraph.sh → ...24/code/build_scripts/ingest_petagraph.sh
diff --git a/petagraph/code/preprocessing/4DN_LOOP.R → ...c_Data_2024/code/preprocessing/4DN_LOOP.R b/petagraph/code/preprocessing/4DN_LOOP.R → ...c_Data_2024/code/preprocessing/4DN_LOOP.R
diff --git a/petagraph/code/preprocessing/4DN_Q.R → ...ific_Data_2024/code/preprocessing/4DN_Q.R b/petagraph/code/preprocessing/4DN_Q.R → ...ific_Data_2024/code/preprocessing/4DN_Q.R
diff --git a/petagraph/code/preprocessing/ASP2019.ipynb → ...ata_2024/code/preprocessing/ASP2019.ipynb b/petagraph/code/preprocessing/ASP2019.ipynb → ...ata_2024/code/preprocessing/ASP2019.ipynb
diff --git a/petagraph/code/preprocessing/CLINVAR.R → ...ic_Data_2024/code/preprocessing/CLINVAR.R b/petagraph/code/preprocessing/CLINVAR.R → ...ic_Data_2024/code/preprocessing/CLINVAR.R
diff --git a/petagraph/code/preprocessing/CMAP.R → ...tific_Data_2024/code/preprocessing/CMAP.R b/petagraph/code/preprocessing/CMAP.R → ...tific_Data_2024/code/preprocessing/CMAP.R
diff --git a/petagraph/code/preprocessing/GTEX.ipynb → ...c_Data_2024/code/preprocessing/GTEX.ipynb b/petagraph/code/preprocessing/GTEX.ipynb → ...c_Data_2024/code/preprocessing/GTEX.ipynb
diff --git a/petagraph/code/preprocessing/GTEXCOEXP.R → ..._Data_2024/code/preprocessing/GTEXCOEXP.R b/petagraph/code/preprocessing/GTEXCOEXP.R → ..._Data_2024/code/preprocessing/GTEXCOEXP.R
diff --git a/petagraph/code/preprocessing/HCOP.ipynb → ...c_Data_2024/code/preprocessing/HCOP.ipynb b/petagraph/code/preprocessing/HCOP.ipynb → ...c_Data_2024/code/preprocessing/HCOP.ipynb
diff --git a/petagraph/code/preprocessing/HGNCHPO.ipynb → ...ata_2024/code/preprocessing/HGNCHPO.ipynb b/petagraph/code/preprocessing/HGNCHPO.ipynb → ...ata_2024/code/preprocessing/HGNCHPO.ipynb
diff --git a/petagraph/code/preprocessing/HPOMP.ipynb → ..._Data_2024/code/preprocessing/HPOMP.ipynb b/petagraph/code/preprocessing/HPOMP.ipynb → ..._Data_2024/code/preprocessing/HPOMP.ipynb
diff --git a/petagraph/code/preprocessing/HSCLO_GENCODE.R → ...a_2024/code/preprocessing/HSCLO_GENCODE.R b/petagraph/code/preprocessing/HSCLO_GENCODE.R → ...a_2024/code/preprocessing/HSCLO_GENCODE.R
diff --git a/petagraph/code/preprocessing/KF/.gitignore → ...ata_2024/code/preprocessing/KF/.gitignore b/petagraph/code/preprocessing/KF/.gitignore → ...ata_2024/code/preprocessing/KF/.gitignore
diff --git a/...graph/code/preprocessing/KF/KF_MAIN.ipynb → ..._2024/code/preprocessing/KF/KF_MAIN.ipynb b/...graph/code/preprocessing/KF/KF_MAIN.ipynb → ..._2024/code/preprocessing/KF/KF_MAIN.ipynb
diff --git a/...processing/KF/KF_create_nodes_edges.ipynb → ...processing/KF/KF_create_nodes_edges.ipynb b/...processing/KF/KF_create_nodes_edges.ipynb → ...processing/KF/KF_create_nodes_edges.ipynb
diff --git a/...de/preprocessing/KF/KF_get_variants.ipynb → ...de/preprocessing/KF/KF_get_variants.ipynb b/...de/preprocessing/KF/KF_get_variants.ipynb → ...de/preprocessing/KF/KF_get_variants.ipynb
diff --git a/petagraph/code/preprocessing/L1000.R → ...ific_Data_2024/code/preprocessing/L1000.R b/petagraph/code/preprocessing/L1000.R → ...ific_Data_2024/code/preprocessing/L1000.R
diff --git a/petagraph/code/preprocessing/MPMGI.ipynb → ..._Data_2024/code/preprocessing/MPMGI.ipynb b/petagraph/code/preprocessing/MPMGI.ipynb → ..._Data_2024/code/preprocessing/MPMGI.ipynb
diff --git a/petagraph/code/preprocessing/MSIGDB.R → ...fic_Data_2024/code/preprocessing/MSIGDB.R b/petagraph/code/preprocessing/MSIGDB.R → ...fic_Data_2024/code/preprocessing/MSIGDB.R
diff --git a/petagraph/code/preprocessing/STRING.R → ...fic_Data_2024/code/preprocessing/STRING.R b/petagraph/code/preprocessing/STRING.R → ...fic_Data_2024/code/preprocessing/STRING.R
diff --git a/...graph/code/publication_figures/.gitignore → ..._2024/code/publication_figures/.gitignore b/...graph/code/publication_figures/.gitignore → ..._2024/code/publication_figures/.gitignore
diff --git a/petagraph/code/publication_figures/README.md → ...a_2024/code/publication_figures/README.md b/petagraph/code/publication_figures/README.md → ...a_2024/code/publication_figures/README.md
diff --git a/petagraph/data_dict.md → Scientific_Data_2024/data_dict.md b/petagraph/data_dict.md → Scientific_Data_2024/data_dict.md
diff --git a/petagraph/data_dict_old.md → Scientific_Data_2024/data_dict_old.md b/petagraph/data_dict_old.md → Scientific_Data_2024/data_dict_old.md
diff --git a/petagraph/user_guide.md → Scientific_Data_2024/user_guide.md b/petagraph/user_guide.md → Scientific_Data_2024/user_guide.md