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GECKO v1.3.4

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@BenjaSanchez BenjaSanchez released this 04 Dec 11:42
be27b7b
  • Features:
    • Generalization of measureAbundance.m to receive any PaxDB file, a relative proteomics dataset, or even nothing at all (PR #58).
    • New utility: Comparative FVA between a model and its enzyme-constrained version (PR #57).
  • Fixes:
    • Consistent definition of what data is in uniprot.tab (PR #48).
    • Proper use of measureAbundance.m from within constrainEnzymes.m (PR #56).
  • Refactoring:
    • Switch all functions that add/change rxns/genes from COBRA to RAVEN (PR #48).
    • Avoid any functions from Simulink (PR #48).