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v1.7.0

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@BryanRumsey BryanRumsey released this 10 Aug 20:17
· 258 commits to main since this release
a41786a

Changes

  • [#756] Added system support for folder with spaces in installation path on Linux and MacOS.
  • [#770] Reaction now accept an ODE propensity function in addition to the stochastic propensity function.
  • [#773] Added an example to demonstrate the correct method of using timespans with negative values.
  • [#786] ODECSolver and TauHybridCSolver now accept integrator options.
  • [#797] Updates to examples.
  • [#817] Updated documentation.
  • [#829] Improved tau hybrid step selection.

Bug Fixes

  • [#787] TimeSpan.arange and TimeSpan.linspace now accept floats for t
  • [#799] Fixed issue with SBML compartments missing the size attribute being set to nan.
  • [#820] Fixed time plotting when using Results.plot_mean_stdev.
  • [#832] Fixed error reporting when importing SBML models.
  • [#841] Fixed multi-firing events in the tau hybrid c solver.
  • [#850] CLE Solver now uses model's timespan if t and increment are not provided.
  • [#853] Fixed Stochastic/Deterministic switching in the tau hybrid solvers.

Full Changelog: v1.6.9...v1.7.0