SiyangJ / NeonateSeg Public

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Neonate segmentation project at NIRAL, UNC, with Dr. Martin Styner.

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Name		Name	Last commit message	Last commit date
Latest commit History 60 Commits
AmygNet		AmygNet
Figures		Figures
ModelCodes		ModelCodes
NewModels		NewModels
NiftyNetModels		NiftyNetModels
Records		Records
SiyangNiftyNetFolder/extensions		SiyangNiftyNetFolder/extensions
Utilities		Utilities
.gitignore		.gitignore
Bern_Inf_Test.ipynb		Bern_Inf_Test.ipynb
Bern_eval.ipynb		Bern_eval.ipynb
Bern_vis.ipynb		Bern_vis.ipynb
CNNvis.ipynb		CNNvis.ipynb
Data_label_stats.ipynb		Data_label_stats.ipynb
Effect_of_Resampling.ipynb		Effect_of_Resampling.ipynb
FindShit.ipynb		FindShit.ipynb
MyNetUtil.ipynb		MyNetUtil.ipynb
README.md		README.md
RemovalForJW.ipynb		RemovalForJW.ipynb
SimpleITK_DataAugmentation.ipynb		SimpleITK_DataAugmentation.ipynb
SiyangConfig.ini		SiyangConfig.ini
Untitled.ipynb		Untitled.ipynb
csv_inspect.ipynb		csv_inspect.ipynb
csv_recorder.ipynb		csv_recorder.ipynb
csv_recorder_func.ipynb		csv_recorder_func.ipynb
data_process.ipynb		data_process.ipynb
data_process_BernNet.ipynb		data_process_BernNet.ipynb
data_process_cr_mask.ipynb		data_process_cr_mask.ipynb
data_process_minimal.ipynb		data_process_minimal.ipynb
data_process_pretrain.ipynb		data_process_pretrain.ipynb
data_process_special.ipynb		data_process_special.ipynb
data_process_trial.ipynb		data_process_trial.ipynb
data_process_trial_2.ipynb		data_process_trial_2.ipynb
label_normalization.ipynb		label_normalization.ipynb
label_normalization_2.ipynb		label_normalization_2.ipynb
nb_py2_1080.sh		nb_py2_1080.sh
nn_inference_eval.ipynb		nn_inference_eval.ipynb
nn_inference_eval_2.ipynb		nn_inference_eval_2.ipynb
nn_inference_eval_3.ipynb		nn_inference_eval_3.ipynb
nn_inference_eval_4.ipynb		nn_inference_eval_4.ipynb
nn_inference_eval_5.ipynb		nn_inference_eval_5.ipynb
nn_inference_eval_6.ipynb		nn_inference_eval_6.ipynb
unet_vis.ipynb		unet_vis.ipynb
unet_vis_2.ipynb		unet_vis_2.ipynb
unet_vis_3.ipynb		unet_vis_3.ipynb
unet_vis_Jenny.ipynb		unet_vis_Jenny.ipynb